Protein Info for QEN71_RS17805 in Paraburkholderia sabiae LMG 24235

Annotation: molybdate ABC transporter permease subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 224 transmembrane" amino acids 14 to 34 (21 residues), see Phobius details amino acids 46 to 65 (20 residues), see Phobius details amino acids 84 to 104 (21 residues), see Phobius details amino acids 144 to 167 (24 residues), see Phobius details amino acids 195 to 215 (21 residues), see Phobius details TIGR02141: molybdate ABC transporter, permease protein" amino acids 9 to 211 (203 residues), 238.1 bits, see alignment E=3.8e-75 PF00528: BPD_transp_1" amino acids 26 to 214 (189 residues), 70 bits, see alignment E=1.1e-23

Best Hits

Swiss-Prot: 44% identical to MODB_ECOLI: Molybdenum transport system permease protein ModB (modB) from Escherichia coli (strain K12)

KEGG orthology group: K02018, molybdate transport system permease protein (inferred from 96% identity to bph:Bphy_4404)

MetaCyc: 44% identical to molybdate ABC transporter membrane subunit (Escherichia coli K-12 substr. MG1655)
ABC-19-RXN [EC: 7.3.2.5]

Predicted SEED Role

"Molybdenum transport system permease protein ModB (TC 3.A.1.8.1)" in subsystem Molybdenum cofactor biosynthesis or Transport of Molybdenum (TC 3.A.1.8.1)

MetaCyc Pathways

Isozymes

No predicted isozymes

Use Curated BLAST to search for 7.3.2.5

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (224 amino acids)

>QEN71_RS17805 molybdate ABC transporter permease subunit (Paraburkholderia sabiae LMG 24235)
MEQAWIPLMLSLKVAGWATALNIVFGVALGFGLARWRSGARDLIDSLLTLPLVMPPTVLG
YYLLVLLGRRGVFGAWLDRFDIQLVFTWQGAVIASMVVAFPLVLKSARAAFESVDPQLER
AARTLGVSETAIFFRVTLPLASRGILAGALLAFARALGEFGATLMIAGNLPGRTQTLSVA
VYAAVQAGDDSTANFLVLVTSVTCVVILVLAGRLVPQHSLMTSR