Protein Info for QEN71_RS17715 in Paraburkholderia sabiae LMG 24235

Annotation: 4-alpha-glucanotransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 726 TIGR00217: 4-alpha-glucanotransferase" amino acids 128 to 701 (574 residues), 345.6 bits, see alignment E=3.4e-107 PF02446: Glyco_hydro_77" amino acids 174 to 690 (517 residues), 385.7 bits, see alignment E=1.7e-119

Best Hits

KEGG orthology group: K00705, 4-alpha-glucanotransferase [EC: 2.4.1.25] (inferred from 94% identity to bph:Bphy_4388)

Predicted SEED Role

"4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)" in subsystem Glycogen metabolism or Maltose and Maltodextrin Utilization (EC 2.4.1.25)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.25

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (726 amino acids)

>QEN71_RS17715 4-alpha-glucanotransferase (Paraburkholderia sabiae LMG 24235)
MATTRRPGISIDTLAARAGFEVEWEDAHHNKKRVPDSTLAALLERMGLPCGNATQIRQSA
AALEAELSGRKLPPLMTVECGRGIALPAAAIKSGSHYRIELESGSLIDGRFTAPKGEAAL
LSPIDEPGYHTLVLNDHRMTLAVAPARCYTVADAWRALHGDDKKTPPMWGIAAQIYGLRR
VGDGGIGDYTALTTLAIESAKRGANALAISPTHAMFSALPGSFSPYSPSSRLWLNVTHID
PAAVFGAQAAQAALDAAGGLDTWTKLEAEPLIDWKTATPLKLKTLRVLFERFCANDRAQD
SPRALEFHGFCERGGRALEDHARFEALHAFQLQHDGEGYWRKWPDALQDPRSPEVEAFAN
EHRHEVEFHLFLQWLASKGLSHAQHAARDAGMAVGLIADLAVGCDSAGSHAWSYRDDMLH
GVSVGAPPDLFNQAGQAWGLTTFSPRAMRTQGFSAFIDMLRAAFASAGGIRIDHILGLRR
LWLVPEGEPAKNGAYLRYPLEDMLRLIALESWRHRAIVIGEDLGTVPPGFRERLSEHGLA
GIRVLWFERTKDGKAFMAPAEWDRGAVATTTTHDLPTVTGWWRGEDIVWRHRVGQTAARA
DGRDPVALAQAERDNDRAALWQAFQKAGIAASDVDPPPPDEAPVDEALAFVAATPSPLVT
YPLEDLLGLADQPNLPGSIDEHPNWRRRVVQPVDALFADETFCDRLLAIERARTDSTSAS
SLSDTP