Protein Info for QEN71_RS17665 in Paraburkholderia sabiae LMG 24235
Annotation: bifunctional tetrahydrofolate synthase/dihydrofolate synthase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
KEGG orthology group: K11754, dihydrofolate synthase / folylpolyglutamate synthase [EC: 6.3.2.12 6.3.2.17] (inferred from 97% identity to bph:Bphy_4378)Predicted SEED Role
"Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17)" (EC 6.3.2.12, EC 6.3.2.17)
MetaCyc Pathways
- superpathway of tetrahydrofolate biosynthesis and salvage (11/12 steps found)
- superpathway of tetrahydrofolate biosynthesis (9/10 steps found)
- tetrahydrofolate biosynthesis I (3/3 steps found)
- folate polyglutamylation (4/5 steps found)
- tetrahydrofolate biosynthesis II (2/3 steps found)
- superpathway of chorismate metabolism (42/59 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 6.3.2.12 or 6.3.2.17
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (436 amino acids)
>QEN71_RS17665 bifunctional tetrahydrofolate synthase/dihydrofolate synthase (Paraburkholderia sabiae LMG 24235) MTTFPTLDAWLTHLESAHPVGIDMGLARISQVRDALQLSFACPVITVGGTNGKGSTCAIL ESILLRAGYSVGCHTSPHLLSFNERARINGEMATDAALLPHFEAVEKARRSLPEPVSLTY FEFTTLAIMHLFAERGLDAVIFEVGLGGRLDAVNILDTDCAIITSIDIDHTDFLGDTRDK IAFEKAGIFRAGKPAICADPVPPQTLIDHAEKIGADLWLFGRDFRYEAQPGNERQQWSYI GPSMRRSALAYPALRGANQLINTTAALAGLEALRDRLPVSAQDIRLGLANVELPGRFQVL PGKPSIVLDVGHNPHAAAVLGQNLGNMGYFPYTYAVFGSMRDKDIAGVLSHLTGEIDHWN VTDLPTPRAASAEELDAALRDAGVTDGPDGGVKRFATPAEAFQDALKRASENDRIVVFGS FYTVAGVMAYRKSQQH