Protein Info for QEN71_RS17665 in Paraburkholderia sabiae LMG 24235

Annotation: bifunctional tetrahydrofolate synthase/dihydrofolate synthase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 436 transmembrane" amino acids 415 to 430 (16 residues), see Phobius details TIGR01499: bifunctional protein FolC" amino acids 27 to 430 (404 residues), 337.1 bits, see alignment E=9.4e-105 PF08245: Mur_ligase_M" amino acids 47 to 268 (222 residues), 41.4 bits, see alignment E=1.6e-14

Best Hits

KEGG orthology group: K11754, dihydrofolate synthase / folylpolyglutamate synthase [EC: 6.3.2.12 6.3.2.17] (inferred from 97% identity to bph:Bphy_4378)

Predicted SEED Role

"Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17)" (EC 6.3.2.12, EC 6.3.2.17)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 6.3.2.12 or 6.3.2.17

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (436 amino acids)

>QEN71_RS17665 bifunctional tetrahydrofolate synthase/dihydrofolate synthase (Paraburkholderia sabiae LMG 24235)
MTTFPTLDAWLTHLESAHPVGIDMGLARISQVRDALQLSFACPVITVGGTNGKGSTCAIL
ESILLRAGYSVGCHTSPHLLSFNERARINGEMATDAALLPHFEAVEKARRSLPEPVSLTY
FEFTTLAIMHLFAERGLDAVIFEVGLGGRLDAVNILDTDCAIITSIDIDHTDFLGDTRDK
IAFEKAGIFRAGKPAICADPVPPQTLIDHAEKIGADLWLFGRDFRYEAQPGNERQQWSYI
GPSMRRSALAYPALRGANQLINTTAALAGLEALRDRLPVSAQDIRLGLANVELPGRFQVL
PGKPSIVLDVGHNPHAAAVLGQNLGNMGYFPYTYAVFGSMRDKDIAGVLSHLTGEIDHWN
VTDLPTPRAASAEELDAALRDAGVTDGPDGGVKRFATPAEAFQDALKRASENDRIVVFGS
FYTVAGVMAYRKSQQH