Protein Info for QEN71_RS16150 in Paraburkholderia sabiae LMG 24235

Annotation: VOC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 161 PF00903: Glyoxalase" amino acids 20 to 136 (117 residues), 68.3 bits, see alignment E=8.1e-23 PF18029: Glyoxalase_6" amino acids 23 to 137 (115 residues), 30 bits, see alignment E=7.2e-11

Best Hits

Swiss-Prot: 52% identical to Y887_MYCTO: Uncharacterized protein MT0910 (MT0910) from Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

KEGG orthology group: None (inferred from 97% identity to bph:Bphy_4084)

Predicted SEED Role

"PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (161 amino acids)

>QEN71_RS16150 VOC family protein (Paraburkholderia sabiae LMG 24235)
MSTPAVKPIPEGMHTLTPHIIVAGAAEAIDFYKKAFNAVEQVRLPGPGGKLMHASLKIGD
STLMLVDEMPDCGGGASYGPKALKGTPVVLHLYVEDADATIAQAEAAGAKVTMPATDMFW
GDRYGQVEDPFGHRWSVATHKRDVTPDEMKSAMEQMAQGRQ