Protein Info for QEN71_RS15010 in Paraburkholderia sabiae LMG 24235

Annotation: glycosyltransferase family 4 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 356 PF13579: Glyco_trans_4_4" amino acids 14 to 162 (149 residues), 44.1 bits, see alignment E=7e-15 PF13439: Glyco_transf_4" amino acids 14 to 166 (153 residues), 86.2 bits, see alignment E=6.6e-28 PF00534: Glycos_transf_1" amino acids 178 to 317 (140 residues), 63.9 bits, see alignment E=3.4e-21 PF13692: Glyco_trans_1_4" amino acids 194 to 315 (122 residues), 45.8 bits, see alignment E=1.9e-15 PF20706: GT4-conflict" amino acids 243 to 293 (51 residues), 31.6 bits, see alignment 2.2e-11

Best Hits

Swiss-Prot: 74% identical to Y986_BURTA: Probable transglycosylase BTH_I0986 (BTH_I0986) from Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)

KEGG orthology group: None (inferred from 95% identity to bph:Bphy_3923)

Predicted SEED Role

"Glycosyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (356 amino acids)

>QEN71_RS15010 glycosyltransferase family 4 protein (Paraburkholderia sabiae LMG 24235)
MKIGLSCNALKYSGGLERYAIEVTRGLVAAGIKLAVFGRAFDPKLPESRLVEPHRINVSF
LPGKWRDEWFSRRLSAMRRDAKVDVLIGCNRVEASEIAICGGTHLGFLSATGRRPSFFDR
RQIALERRQYRRARFVVAHSPQMRDELRHLYGVDDAKIRVLYPPVDNGRFSPVTSDERRA
LRKRFGFADDEIVLLFPSSSHERKGLPLIEAALRDLDLPIVVAVAGRPPERTSKRLRYIG
YVNTIEEGYRAADYTILASSYEPFGLVGVESVMCGTPVILSSNIGCHDVIAPEAKLVFAP
NDVDSLRRVLAQAVSDARGERPSTPAFSRDAVLYDPGLGRHVSDLLALADQACEWP