Protein Info for QEN71_RS13035 in Paraburkholderia sabiae LMG 24235

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 510 transmembrane" amino acids 20 to 46 (27 residues), see Phobius details amino acids 58 to 77 (20 residues), see Phobius details amino acids 86 to 107 (22 residues), see Phobius details amino acids 115 to 136 (22 residues), see Phobius details amino acids 146 to 169 (24 residues), see Phobius details amino acids 175 to 195 (21 residues), see Phobius details amino acids 207 to 226 (20 residues), see Phobius details amino acids 237 to 255 (19 residues), see Phobius details amino acids 267 to 287 (21 residues), see Phobius details amino acids 307 to 328 (22 residues), see Phobius details amino acids 340 to 359 (20 residues), see Phobius details amino acids 365 to 383 (19 residues), see Phobius details amino acids 404 to 425 (22 residues), see Phobius details amino acids 483 to 504 (22 residues), see Phobius details PF07690: MFS_1" amino acids 27 to 416 (390 residues), 181.7 bits, see alignment E=9.9e-58

Best Hits

KEGG orthology group: None (inferred from 89% identity to bph:Bphy_3582)

Predicted SEED Role

"Multidrug resistance protein B"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (510 amino acids)

>QEN71_RS13035 MFS transporter (Paraburkholderia sabiae LMG 24235)
MSSISADRSASRSASRGTPLLLIASMGCAMTVLDTNVVGIVLPTIARDLNASFADIEWVI
SAYVLCFAALLLPAGSLADRYGRKRVFLTGIALFAAASLACGIAPSARLLYVARAAQGVG
AAFLLAPALAIIGHAFHDEHERARAWAVWGGIMGLTMVLSPLIGGVISAWLGWRWAFAIN
VPICALLATGVVRIVDESRDPTPRALDLPGIALFASAMFALTWALILGPDHGWFSEAVAL
RACAGVALFALFAWVESRRAHPMLDLALFRSLPFVGAIVAMFAYASSAQVMASLLPLFLQ
NARGESALTAGAGMLPFALAMLILPQLGRKLAAWMDSCQILTLGLAVVACGNLAMMLAAR
STDHAWLIVAMALLGSGGGLLNGETQKAIMGTVPRERAGMASGISTTSRFTGILLGFSGL
GAVLAEGVRSALSARMADTHLPFVQGFAERVMAGDFARAFALYPPASLDTLVHVAHSSYG
EGFARAFTAAAIVAGVCAVIVFLSMKHKKR