Protein Info for QEN71_RS08565 in Paraburkholderia sabiae LMG 24235

Annotation: UDP-forming cellulose synthase catalytic subunit

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 743 transmembrane" amino acids 34 to 56 (23 residues), see Phobius details amino acids 62 to 79 (18 residues), see Phobius details amino acids 86 to 105 (20 residues), see Phobius details amino acids 119 to 141 (23 residues), see Phobius details amino acids 414 to 438 (25 residues), see Phobius details amino acids 442 to 460 (19 residues), see Phobius details amino acids 481 to 499 (19 residues), see Phobius details amino acids 528 to 548 (21 residues), see Phobius details amino acids 560 to 580 (21 residues), see Phobius details TIGR03030: cellulose synthase catalytic subunit (UDP-forming)" amino acids 40 to 720 (681 residues), 886.6 bits, see alignment E=5.2e-271 PF13641: Glyco_tranf_2_3" amino acids 164 to 389 (226 residues), 55.4 bits, see alignment E=2e-18 PF00535: Glycos_transf_2" amino acids 166 to 336 (171 residues), 82.4 bits, see alignment E=9.2e-27 PF13632: Glyco_trans_2_3" amino acids 245 to 438 (194 residues), 61 bits, see alignment E=3.8e-20 PF03552: Cellulose_synt" amino acids 333 to 458 (126 residues), 40.4 bits, see alignment E=3.9e-14 PF07238: PilZ" amino acids 585 to 681 (97 residues), 44 bits, see alignment E=6.1e-15

Best Hits

KEGG orthology group: K00694, cellulose synthase (UDP-forming) [EC: 2.4.1.12] (inferred from 96% identity to bph:Bphy_3256)

Predicted SEED Role

"Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12)" (EC 2.4.1.12)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.4.1.12

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (743 amino acids)

>QEN71_RS08565 UDP-forming cellulose synthase catalytic subunit (Paraburkholderia sabiae LMG 24235)
MSTAPEDILEAVDAEPPRRSRFDRLASHLIDGRIIGSTPVTIVLVLFALAALFFVFTVPL
AFGEQLTFAICCFVCALLFRRAKGHYATLVMIMLSVIATGRYMYWRLTETTYWERPLDAA
WGLLLVSAEVYAALVLMLGYFQTAWPLRRKPLPLPVDRNDWPTVDIFIPTYNEPLSVVKP
TVYAAIALDYPKDKLSIHVLDDGRRPEFKAFCEEVGVAWTIRSHNRHAKAGNINEALKIT
DGEYFAIFDCDHIPTRSFLQVGLGWFLRDKKLSMLQTPHHFFSADPFEKNLGTFRKVPNE
GELFYGLVQDGNDLWNATFFCGSCALLRRTMVEEIGGIAVETVTEDAHTALKLHRKGYTT
AYLAIPQAAGLATESLGGHIGQRIRWARGMTQIFRIDNPLTGGGLSFGQRLCYLNAMMHF
FYGIPRLVFLTAPLSFLFFNAHIIQAAAGTIAIFALPHMFHANITNSRMQQKFRHSFWSE
VYESVLASYITAPTLLALINPKLGKFNVTAKGGRIEEQYFDWAISRPYLILLALNLIGFV
VGCVHIALHASSHSEVQTTVLNLAWTGYNMLILGASVAAAREQRQVRSTHRVAMRIPASL
RFSTGRTLTCETVDYAEGGLALQLPAAIQVPLHEKVVVSLFRGHDEFVFPADVTYAVPGR
VGLKFAAMTREQELDFVQSTFARADAWTGWAEGREVDTPLKSLSHVMRVGLGGIGGLFEH
LYADLRTLRSRRKAAANDAKNGK