Protein Info for QEN71_RS07885 in Paraburkholderia sabiae LMG 24235

Annotation: aromatic acid exporter family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 370 transmembrane" amino acids 29 to 46 (18 residues), see Phobius details amino acids 52 to 72 (21 residues), see Phobius details amino acids 85 to 115 (31 residues), see Phobius details amino acids 121 to 137 (17 residues), see Phobius details amino acids 149 to 167 (19 residues), see Phobius details PF06081: ArAE_1" amino acids 27 to 162 (136 residues), 26.6 bits, see alignment E=2.9e-10

Best Hits

KEGG orthology group: None (inferred from 74% identity to bge:BC1002_3936)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (370 amino acids)

>QEN71_RS07885 aromatic acid exporter family protein (Paraburkholderia sabiae LMG 24235)
MSTVSFVHKPLTPFRRALARFSLSENAKYVKLTLGLWIGFSIPYNLGYPEAAVALASSTM
LTLALGSSISAARGYFYRRVMSNVVAMPIATLVIWVTAPHLWLGTLLLPLVIFTIVRLRP
SLFQMTSITIPMTLVLYTGEHLPLLEQRLIGVVLGMLLGFILQQVAFPPDHGFWANRLVN
DGNEQASEALAQLASGQPDRAELKAMTDRLRKSSTDLKEAHGLLKLDLQQAWLSPHLQRN
RVRLPLFWCYHELFDSLVNFLETVDTFHEQFAALDPQWREAFLAGLAKLVDAHGKLALVA
DLRVERAPLEVKPLQLDALREIVDTLPAPGVFTSVYLGHLAGYGILLCRLSDMHTEHLAA
GAADGGVKQI