Protein Info for QEN71_RS07605 in Paraburkholderia sabiae LMG 24235

Annotation: FUSC family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 725 transmembrane" amino acids 39 to 60 (22 residues), see Phobius details amino acids 88 to 108 (21 residues), see Phobius details amino acids 114 to 131 (18 residues), see Phobius details amino acids 138 to 157 (20 residues), see Phobius details amino acids 163 to 188 (26 residues), see Phobius details amino acids 400 to 422 (23 residues), see Phobius details amino acids 429 to 446 (18 residues), see Phobius details amino acids 453 to 475 (23 residues), see Phobius details amino acids 481 to 499 (19 residues), see Phobius details amino acids 506 to 526 (21 residues), see Phobius details amino acids 535 to 556 (22 residues), see Phobius details PF04632: FUSC" amino acids 40 to 722 (683 residues), 695.3 bits, see alignment E=1e-212 PF13515: FUSC_2" amino acids 52 to 183 (132 residues), 47.5 bits, see alignment E=2e-16

Best Hits

KEGG orthology group: None (inferred from 91% identity to bph:Bphy_5075)

Predicted SEED Role

"FIG028593: membrane protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (725 amino acids)

>QEN71_RS07605 FUSC family protein (Paraburkholderia sabiae LMG 24235)
MKRQHAIKQASSDTFGWSTSIPRAIVDAGKDWATTDGLIWLHLFKTVTAALLALGIAMLF
ELQQPRTAMTTVFVLMQPFSGMVLAKSFYRIVGTFVGMLAALLLGALFAQQPELYMLGIT
VWMGACVAAAVRYRHFRWYGFVLAGYTAALIGIPTVMEPNGLFLAALTRAAEVAIGIVCS
AAVSALIVPRRSSLALQNALQSRHLNFSAFAVKVLDGAVERGASERYFADLVDEVVGFEA
TRAFAAFEDPGMRSRSQVLARLNHEFMDVCARLHALHQLRKRLRGNAATQVEQATSPYFH
ELSQLLGAHKERRFDSSDAARVAIRLKSFQATLPARMRATRRPLESAEPQCLPDFDTAGE
LLYRFIVEFIRYIDNYASLETNHNPARERPAVRYVSRTNGFVVAGTFARTAAVVGTVSAF
WIATNWPSGGMAVIGAALTCALTSSAPNPVKLALQMAVGAACATVAGYLVTCYLYPAIDG
FPLLCAMLAPLLAAGTFFASRTKTAGYGVGFTVFFCLLAAPDNVVVYAPDLLVNNGVAIV
VAMLVTAVGSAIVFPVQMPWLTARIEGDLRSQITLACTAPLTGLAQRFQSSTHDLMHQLR
MLLPKRSRRHRRALRWMLVTLEVGHATIDLRSEIERATYAGDLHSRWKPSLDRVTRDLAE
LFERPDKAHADRTQISVRAAMRVVQQVLETVHTDRDRRHDQQRILSCLHFIRTALLDKDA
PFDAR