Protein Info for QEN71_RS03830 in Paraburkholderia sabiae LMG 24235

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 591 transmembrane" amino acids 281 to 307 (27 residues), see Phobius details amino acids 491 to 509 (19 residues), see Phobius details PF00535: Glycos_transf_2" amino acids 9 to 160 (152 residues), 70 bits, see alignment E=3.8e-23 PF13641: Glyco_tranf_2_3" amino acids 10 to 97 (88 residues), 27.8 bits, see alignment E=3.5e-10 PF03279: Lip_A_acyltrans" amino acids 369 to 569 (201 residues), 31.2 bits, see alignment E=2.1e-11

Best Hits

KEGG orthology group: None (inferred from 91% identity to bph:Bphy_0695)

Predicted SEED Role

"FIG143263: Glycosyl transferase / Lysophospholipid acyltransferase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (591 amino acids)

>QEN71_RS03830 glycosyltransferase family 2 protein (Paraburkholderia sabiae LMG 24235)
MSEAIFAPCVVIPIYNHKDAIGGTVERLLVHKLPIFVVDDGSDEATQAVLAKLACQYREQ
MTLLRLPVNGGKGAAVMAGLRAAKRAGYTHALQIDADGQHDANDVPLFLDAARAEPGAVI
LGRPVYDESVPKSRLYGRYLTHVWVWIETLSFTIRDSMCGFRLYPLDAACALIDSVQLPT
RMDFDIEILVRLYWRRLAFRAIPTRVVYATDGVSHFDVLWDNVRISASHTRLACGMLLRL
PMLLAHKFMPRKSGASTSHSNGDNTKWWRVAERGSRLGMRLLALSCKLFGMGFTALWLHP
VVAYFLLTGRDARAASRTYFTHLEQAAQGERTPRPGWRSAYRQMLAFAQSGLDKLAAWSG
RIDSSDVVFDDSSAFDELIASKRGALVIGAHLGNLEMTRALAAKGGHAKVTAIVYTEHAK
RFNSVLSTASSDFAKRLVQVSDFGPETSMMMQERIDAGELLVIVGDRVPARDSGRTTDAQ
FLGATAPFAQGPYVLAHALGCPVYLFFCLKERDERNRERYRLYFEPFAERIDLPRRERAQ
HIAAWAQRYASRLEHYCRKAPYQWFNFFDFWARPRKAITGAIPHGDANVRT