Protein Info for QEN71_RS01915 in Paraburkholderia sabiae LMG 24235

Annotation: aquaporin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 247 transmembrane" amino acids 9 to 28 (20 residues), see Phobius details amino acids 34 to 55 (22 residues), see Phobius details amino acids 84 to 104 (21 residues), see Phobius details amino acids 131 to 151 (21 residues), see Phobius details amino acids 160 to 179 (20 residues), see Phobius details amino acids 206 to 229 (24 residues), see Phobius details PF00230: MIP" amino acids 6 to 224 (219 residues), 141.9 bits, see alignment E=1.4e-45

Best Hits

Swiss-Prot: 50% identical to AQPZ_RHOPA: Aquaporin Z (aqpZ) from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)

KEGG orthology group: None (inferred from 90% identity to bph:Bphy_0357)

Predicted SEED Role

"Aquaporin Z"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (247 amino acids)

>QEN71_RS01915 aquaporin (Paraburkholderia sabiae LMG 24235)
MSGLGKRLIVEGAGTAWLVFIGCGTAALNTGAQGIGVIAVPLAFGLALATATYVLGRFSG
AHFNPAVTVAFVTAQRFPVRDLAPYIAAQVLGAAAGAALLVYIASGRPGFELASSEFGAT
GYGDHSPADYSLHSALAVEITMSFAFVLARMLVSNGRWANLVGPLVAGLWLMLGYVVATP
VTNASLNPARSTGPALFVGDWALDQLWLFWAAPLAGGVLAGLLHSRVFGEPRDVFMQRRE
DRRGESA