Protein Info for Psyr_4478 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: Alpha/beta hydrolase fold protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 272 PF00561: Abhydrolase_1" amino acids 21 to 256 (236 residues), 131.8 bits, see alignment E=1.1e-41 PF12697: Abhydrolase_6" amino acids 23 to 260 (238 residues), 86.9 bits, see alignment E=9.6e-28 PF12146: Hydrolase_4" amino acids 23 to 253 (231 residues), 76.1 bits, see alignment E=8.1e-25 PF01738: DLH" amino acids 186 to 264 (79 residues), 26 bits, see alignment E=2e-09 PF00326: Peptidase_S9" amino acids 210 to 270 (61 residues), 22.7 bits, see alignment E=1.8e-08

Best Hits

Swiss-Prot: 78% identical to ESTE_PSEFL: Arylesterase from Pseudomonas fluorescens

KEGG orthology group: K00433, chloride peroxidase [EC: 1.11.1.10] (inferred from 100% identity to psb:Psyr_4478)

Predicted SEED Role

"Arylesterase"

Isozymes

No predicted isozymes

Use Curated BLAST to search for 1.11.1.10

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZMW4 at UniProt or InterPro

Protein Sequence (272 amino acids)

>Psyr_4478 Alpha/beta hydrolase fold protein (Pseudomonas syringae pv. syringae B728a ΔmexB)
MSTFNTKDGTEIYYKDWGTGKPVLFSHGWPLDADMWEYQMQYLSSRGYRTIAFDRRGFGR
SDQPWTGYDYDTFADDIAELIEHLDLREVTLVGFSMGGGDVTRYIAKYGSERVAKLALLG
SVTPFFLKTGDNPEGVDQSVFDGITAGLLKDRAQFISDFASTFYGINHGQKVSEGVQTQT
LNIALLASLKGTLDCVTAFSATDFRPDMAKIDVPTLVIHGDDDQVVPFEASGKRAAAMIK
GAELKVYPGAPHGFAVTHAETLNKDLLTFVQG