Protein Info for Psyr_3711 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: Dienelactone hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 262 signal peptide" amino acids 1 to 19 (19 residues), see Phobius details PF01738: DLH" amino acids 38 to 260 (223 residues), 165.7 bits, see alignment E=3.5e-52 PF02230: Abhydrolase_2" amino acids 109 to 220 (112 residues), 23.3 bits, see alignment E=1.6e-08

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_3711)

Predicted SEED Role

"Dienelactone hydrolase family"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZQ29 at UniProt or InterPro

Protein Sequence (262 amino acids)

>Psyr_3711 Dienelactone hydrolase (Pseudomonas syringae pv. syringae B728a ΔmexB)
MRVWIAMIMMGLTGLAQAAIKTEQIDYKSADGTKLVGYYAYDDAVKGPRPGVLVVHEWWG
LNDYAKRRARDLAALGYSAMAIDMYGEGKNTEHPKDAMAFMQAALKDSDAADKRFDAGLE
QLKKQPQTDPKKIAAIGYCFGGKIVLDAARRGEPLLGVVSFHGALVTNTPAKPGIKVPML
VEHGAKDSMVTPENVTAFKKEMDDAKADYKFVSIDGAKHGFTNPDADRLSHGEHGGPDIG
YSKSADESSWADMKEFFKKIFG