Protein Info for Psyr_2526 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 528 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details PF14401: RLAN" amino acids 58 to 208 (151 residues), 175.9 bits, see alignment E=6.2e-56 PF08443: RimK" amino acids 318 to 495 (178 residues), 32.5 bits, see alignment E=1e-11 PF07478: Dala_Dala_lig_C" amino acids 342 to 492 (151 residues), 31.1 bits, see alignment E=2.6e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to psb:Psyr_2526)

Predicted SEED Role

"ribosomal protein S6 glutaminyl transferase related protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZTF7 at UniProt or InterPro

Protein Sequence (528 amino acids)

>Psyr_2526 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein (Pseudomonas syringae pv. syringae B728a ΔmexB)
MSAAQVKMNEVSAQLALSATTRRADPTTLFAAQRQLVIIVERLEDWASYFPSEDLISAQD
YLEKPLKATAGRRVQVINLCRSYKYLGHGYYCSLLAEARQHNVIPSVKTISELTRKSLYG
LALDDLDKLLETALEDHPYDDTEGFTLTLYFGQTTLEPLKDLARQLFEVFPCPILMVEFR
KRDNWHIAGIKAGALPRLREDQQDEFATALEGFSRNVWRQPSSRRMARYDLAILHDPQEQ
LPPSNPEALANFIRVGQRLGIDVELIEKKDYARLAEYDALLIRETTSVDNHTYRFAKKAE
SEGLVVMDDSTSILRCTNKVYLTDLLKSHDLGMPRTEILYKDRPEELQHVATRLGFPLVL
KIPDGCFSRGVIKVSTPEEMHTATTQLFEHSVLLLAQEFFYTEYDWRIGILNRKPIFACQ
YFMSKGHWQIYNHKAIGAEVIGECRTLAVHEAPRAVVELALKTANLIGDGLYGVDLKQSG
DQVVVIEVNDNPNLDAGIEDAYLQDDLYSLVLEEFVRRLELKRLGQAW