Protein Info for Psyr_0811 in Pseudomonas syringae pv. syringae B728a ΔmexB

Annotation: Integral membrane protein TerC

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 344 transmembrane" amino acids 6 to 29 (24 residues), see Phobius details amino acids 42 to 62 (21 residues), see Phobius details amino acids 76 to 97 (22 residues), see Phobius details amino acids 107 to 129 (23 residues), see Phobius details amino acids 132 to 132 (1 residues), see Phobius details amino acids 135 to 153 (19 residues), see Phobius details amino acids 210 to 234 (25 residues), see Phobius details amino acids 250 to 270 (21 residues), see Phobius details amino acids 282 to 300 (19 residues), see Phobius details amino acids 312 to 333 (22 residues), see Phobius details TIGR03718: integral membrane protein, TerC family" amino acids 10 to 334 (325 residues), 343.1 bits, see alignment E=8.1e-107 PF03741: TerC" amino acids 74 to 298 (225 residues), 137.4 bits, see alignment E=2.4e-44

Best Hits

Swiss-Prot: 70% identical to TERC_SERMA: Tellurium resistance protein TerC (terC) from Serratia marcescens

KEGG orthology group: K05794, tellurite resistance protein TerC (inferred from 100% identity to psb:Psyr_0811)

Predicted SEED Role

"Integral membrane protein TerC"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q4ZYA3 at UniProt or InterPro

Protein Sequence (344 amino acids)

>Psyr_0811 Integral membrane protein TerC (Pseudomonas syringae pv. syringae B728a ΔmexB)
MESTSLGFPPLTMAVFVGLAVTAMAIDMFSHRGNKPITLAQASAWSIFWVAISLAFAGFL
YVQHGSEVATLFVTGYALEKVLSVDNLFVFMALFSWFKIPDGLRHRVLYWGIIGAIVFRG
IFVAIGTGLLALGPWVEVVFAVIVAWTAIMMLRAGDDDDEEVDYSQHMAYRFAKKLFPVW
PKLHGSNFFVSRSVLEQEVKKPENAGITLAAKGALFATPLFLCLVVAEISDVLFAFDSVP
AIIAVSREPLIVFSAMLFAILGLRTLYFVLEALKRYLVHLEKAVIALLFFIALKLGLNAT
NHLFHHGYEISANASLLVVVVVLIIGIVASLLFPGKDESAEEKA