Protein Info for PfGW456L13_576 in Pseudomonas fluorescens GW456-L13

Annotation: PUTATIVE ZINC PROTEASE PROTEIN

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 341 PF10023: Aminopep" amino acids 10 to 328 (319 residues), 456.1 bits, see alignment E=3.9e-141

Best Hits

KEGG orthology group: None (inferred from 82% identity to pfo:Pfl01_0093)

Predicted SEED Role

"PUTATIVE ZINC PROTEASE PROTEIN"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QJF9 at UniProt or InterPro

Protein Sequence (341 amino acids)

>PfGW456L13_576 PUTATIVE ZINC PROTEASE PROTEIN (Pseudomonas fluorescens GW456-L13)
LLLNGCTSTSYYSQLASGQLQLLRAREPVSSVIADPARDQKLRTHLEQSQKARTFASQQL
HLPDNQSYRLYADIGRPFVVWNVFATPEFSLKPVNHCFPIAGCVAYRGYYSQSAARGEAA
LQRLQGMDVSIGGVEAYSTLGWFNDPIISSMMGWGDERLATLIFHELAHQRFYVKDDTEF
NESFATFVEQEGTRQWRAYRHMPPDNNAQARQRDQFTELVLKTRTRLEKLYTLPLPTEQM
RQRKAAEFERLRSEYRQLRDSQWAADKRYDAWIHAPMNNARLLPFGLYDQWVPAFAALFH
QEGGDWLKFYTAVEKLGALPTGERKAALKVLAGGADQPKNQ