Protein Info for PfGW456L13_4650 in Pseudomonas fluorescens GW456-L13

Annotation: membrane protein, putative

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 880 transmembrane" amino acids 35 to 56 (22 residues), see Phobius details amino acids 76 to 95 (20 residues), see Phobius details amino acids 109 to 130 (22 residues), see Phobius details amino acids 150 to 171 (22 residues), see Phobius details amino acids 188 to 209 (22 residues), see Phobius details amino acids 238 to 261 (24 residues), see Phobius details amino acids 267 to 284 (18 residues), see Phobius details amino acids 292 to 312 (21 residues), see Phobius details amino acids 318 to 335 (18 residues), see Phobius details amino acids 350 to 374 (25 residues), see Phobius details amino acids 396 to 413 (18 residues), see Phobius details amino acids 422 to 442 (21 residues), see Phobius details amino acids 448 to 466 (19 residues), see Phobius details amino acids 478 to 499 (22 residues), see Phobius details amino acids 522 to 541 (20 residues), see Phobius details PF03706: LPG_synthase_TM" amino acids 37 to 328 (292 residues), 39.3 bits, see alignment E=5.8e-14 PF09924: LPG_synthase_C" amino acids 566 to 852 (287 residues), 321.6 bits, see alignment E=4.5e-100

Best Hits

KEGG orthology group: K14205, phosphatidylglycerol lysyltransferase [EC: 2.3.2.3] (inferred from 94% identity to pfo:Pfl01_1194)

Predicted SEED Role

No annotation

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.3.2.3

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293Q5X8 at UniProt or InterPro

Protein Sequence (880 amino acids)

>PfGW456L13_4650 membrane protein, putative (Pseudomonas fluorescens GW456-L13)
MRANSSDSQDTVTATQPINAERLRLLDRLSKYRQPIGLAVTLLLFAIALIACRHLLSELD
LNALHDSILDVPKPALMGALATTVVGFIILLGYEWSASRYAGASLAPRTLALGGFTAFAI
GNAIGLSMLSGGSVRYRLYARHGLGAAEVARMTLFASLSLGCALPPLAALATLSDLPAAS
SALGLSETLLGVVATAVLVLFSVLAIGIYRRRLPEQPYPDNLLVRIGRRTLRLPGRRLTF
LQLVITALDVAAAATVLYLLLPETPPFGAFLLVYLLALAAGVLSHVPGGVGVFEAILLAA
FSDTLGAAPLAAALLLYRLIYVVLPLLVACLLLLINEGQRLFQTRQTLRAASGLAAPILA
VLVFLSGVVLLFSGVTPEIDTRLEHIGFLIPHRLVDASHFGASLVGVLCLLLAQGLRRRL
SAAWMLTTILLLVGALLSLLKGFDWEEASLMVLTASLLGVFRRSFYRPSRLTEVPFSPLY
LVASLCVLGASIWLLLFAYQDVPYSHQLWWQFTLDADAPRGLRSLLGAAVLLVVVSLTWL
LRTARPVIHLPTPDELERASKILMASAQPDGGLALTGDKALLFHPNDEAFLMYARRGRSL
VALYDPIGPGQQRAEMIWQFRDLCDIHHARPVFYQVRAENLPYYMDIGLTAIKLGEEARV
DLKRFDLEAKGKEMKDLRYTWNRGTRDGLSLEIHEPGQAPMDELKVISDAWLTGKNVREK
GFSLGRFSDDYLKHFRIAVIRFEGRPVAFANLLETYGHDLASLDLMRAHPDAPKLTMEFM
MVGLIQHYKNHGYARFSLGMVPLSGLQPRRGAPLTQRLGSMVFRRGEQLYNFQGLRRFKD
KFQPDWEPRYMAVPAGLDPLVALADTAALIAGGLTGLVKR