Protein Info for PfGW456L13_4332 in Pseudomonas fluorescens GW456-L13

Annotation: Flagellar synthesis regulator FleN

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 276 PF10609: ParA" amino acids 8 to 247 (240 residues), 83.6 bits, see alignment E=5.4e-27 PF13614: AAA_31" amino acids 8 to 165 (158 residues), 58.9 bits, see alignment E=2.3e-19 PF06564: CBP_BcsQ" amino acids 8 to 148 (141 residues), 23.4 bits, see alignment E=1.4e-08 PF09140: MipZ" amino acids 9 to 133 (125 residues), 23.8 bits, see alignment E=9.3e-09 PF01656: CbiA" amino acids 10 to 225 (216 residues), 62.2 bits, see alignment E=1.7e-20 PF00142: Fer4_NifH" amino acids 11 to 257 (247 residues), 46.4 bits, see alignment E=1.3e-15 PF02374: ArsA_ATPase" amino acids 12 to 45 (34 residues), 26.1 bits, see alignment 1.8e-09

Best Hits

KEGG orthology group: K04562, flagellar biosynthesis protein FlhG (inferred from 99% identity to pba:PSEBR_a1497)

Predicted SEED Role

"Flagellar synthesis regulator FleN" in subsystem Flagellar motility or Flagellum

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0F4TP09 at UniProt or InterPro

Protein Sequence (276 amino acids)

>PfGW456L13_4332 Flagellar synthesis regulator FleN (Pseudomonas fluorescens GW456-L13)
MGSMHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLGLANVDVLLGLTPK
RTLADVIEGRCELRDVLLQGPGGIRIVPAASGTQSMVHLSPAQHAGLIQAFSDIGDNLDV
LVIDTAAGIGDSVVSFVRAAQEVLLVVCDEPTSITDAYALIKLLNRDYGMNRFRVLANMA
QSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDESVRKAVQKQRAVYEAFPRSKCSLAF
KAIAQKVDTWPLPANPRGHLEFFVERLVQQTAGPVL