Protein Info for PfGW456L13_3744 in Pseudomonas fluorescens GW456-L13

Annotation: Ethanolamine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 437 transmembrane" amino acids 12 to 31 (20 residues), see Phobius details amino acids 37 to 59 (23 residues), see Phobius details amino acids 79 to 106 (28 residues), see Phobius details amino acids 112 to 132 (21 residues), see Phobius details amino acids 142 to 163 (22 residues), see Phobius details amino acids 179 to 201 (23 residues), see Phobius details amino acids 222 to 244 (23 residues), see Phobius details amino acids 271 to 295 (25 residues), see Phobius details amino acids 319 to 336 (18 residues), see Phobius details amino acids 342 to 364 (23 residues), see Phobius details amino acids 376 to 398 (23 residues), see Phobius details amino acids 404 to 423 (20 residues), see Phobius details PF13520: AA_permease_2" amino acids 15 to 400 (386 residues), 115.9 bits, see alignment E=2.3e-37 PF00324: AA_permease" amino acids 22 to 411 (390 residues), 83 bits, see alignment E=1.9e-27

Best Hits

KEGG orthology group: None (inferred from 53% identity to swi:Swit_4353)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QTE8 at UniProt or InterPro

Protein Sequence (437 amino acids)

>PfGW456L13_3744 Ethanolamine permease (Pseudomonas fluorescens GW456-L13)
VLKKSALGWPKIAGLGIALVVAGQFSGWNFGLAAGGWLNMLIATLLMALLCGGLALCVAE
MSTALPSAGGVFVYAQSAFGPFVGYLVGVACALALTIGTGAAATFICAYTESIFGLGGWP
VKIALFAVIIGIHMRGVGEAMGLTFIAGVIAVVALLTFGVAMAPHVELANLLKLPASVAT
PVSLGGIFACVPFAIWLFITVEQTGSAAEEAHNPGRTMPRGILAAIGTLLVTALVVLVCA
PGAGGVELVGSAGDPLYAAMSSNSAFGEGSWLARVIGCGAVFGLIATFFSLVYAASRQLF
AMARDGLFPHWLGKTGKRGTPYPALLLIGAIGLPLSEVDPATVMLAVVLLLNVCYLFIFG
AYLHIKRNQPDLPRPFTLVGGKLVAWLGLALTLVVIAACFQLDMLMLFALAVTFTLCIFN
YLLRNRRATVIEVPDHA