Protein Info for PfGW456L13_3736 in Pseudomonas fluorescens GW456-L13

Annotation: potassium efflux system KefA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 798 signal peptide" amino acids 1 to 42 (42 residues), see Phobius details transmembrane" amino acids 221 to 240 (20 residues), see Phobius details amino acids 261 to 284 (24 residues), see Phobius details amino acids 304 to 321 (18 residues), see Phobius details amino acids 343 to 362 (20 residues), see Phobius details amino acids 372 to 391 (20 residues), see Phobius details amino acids 413 to 436 (24 residues), see Phobius details amino acids 442 to 461 (20 residues), see Phobius details amino acids 506 to 530 (25 residues), see Phobius details amino acids 550 to 568 (19 residues), see Phobius details amino acids 588 to 611 (24 residues), see Phobius details amino acids 617 to 636 (20 residues), see Phobius details PF12607: DUF3772" amino acids 145 to 202 (58 residues), 43.8 bits, see alignment 2.5e-15 PF00924: MS_channel_2nd" amino acids 635 to 700 (66 residues), 74.4 bits, see alignment E=9.3e-25 PF21082: MS_channel_3rd" amino acids 714 to 792 (79 residues), 25.3 bits, see alignment E=2.5e-09

Best Hits

KEGG orthology group: None (inferred from 66% identity to pfo:Pfl01_2392)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QNF4 at UniProt or InterPro

Protein Sequence (798 amino acids)

>PfGW456L13_3736 potassium efflux system KefA (Pseudomonas fluorescens GW456-L13)
MRNVLKSMIYVAFAVLVASPGWLLAGDMADAPALAPAPAPAAPIISISDSELLGVQNQLN
SLKQQVSQASNYTQLESSQDQVQVLIQEIERLSTSLLPGQAQLQAQLNVLGPVPLDENAQ
VTTAITTQRDALGEQKNKIDSQLKTLAALKISAAELITQIASIRRSLLEAEVTQQTSSIL
SPRFWSPLFALPIEDRQRFSVLIEQLEATHRAAWQPGQRGITAILLILALLIWTVGRDLA
GRVLAWLCFHRMPAGRLRRSSLALASVMATVLTAGIALQLLHFAGTRQLPYPPLLADLAQ
YLEKLAYTCVLITGLSRALLSTKHPSWRLPDIADPVALAMEPYPRLLASLLLVLVTLVQM
SNVTGMSAEVVLFGRGIVALVAALVIGALLLRVSKTRRDLIVAGEAPEGVTTFAGLIYTF
TGAAVVVSLFALLIGYVTMARFITYEMVWIFIICAGFYLLTQVYQDTCDYVFSPRQPTGK
TIKQLLGIGNPRLEQICTVLSGAGRAILILIGLIALFVGGIGTTLGQLFTGTVAVLGGEG
LRKLNIVPDNLMHALLTLMIGVYLIRTLRRWLDREFLPKTEMDPGMCASLSTLFANIGYV
SVVLLTLASLGIKWTNLAWIVSALSVGIGFGLQEIVKNFISGLILLTERPVKVGDLISIS
GVEGDIRRINVRATEIQLADRSIMIVPNSHLISQNLRNVTLGGSAQGVVILELMFPLDID
PELVQNLLMDTYTEHESILDKPAPFLRFSQLKPEGITLTITGYVGSPRTVGAIKSQLLFE
ILKRLGAAGIELAKPPAA