Protein Info for PfGW456L13_3708 in Pseudomonas fluorescens GW456-L13

Annotation: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1052 signal peptide" amino acids 1 to 34 (34 residues), see Phobius details transmembrane" amino acids 340 to 358 (19 residues), see Phobius details amino acids 365 to 384 (20 residues), see Phobius details amino acids 390 to 411 (22 residues), see Phobius details amino acids 443 to 465 (23 residues), see Phobius details amino acids 484 to 505 (22 residues), see Phobius details amino acids 538 to 555 (18 residues), see Phobius details amino acids 873 to 891 (19 residues), see Phobius details amino acids 898 to 918 (21 residues), see Phobius details amino acids 924 to 948 (25 residues), see Phobius details amino acids 982 to 1001 (20 residues), see Phobius details amino acids 1009 to 1032 (24 residues), see Phobius details TIGR00914: heavy metal efflux pump, CzcA family" amino acids 1 to 1039 (1039 residues), 1382.1 bits, see alignment E=0 PF00873: ACR_tran" amino acids 6 to 1035 (1030 residues), 773.2 bits, see alignment E=1.9e-236

Best Hits

Swiss-Prot: 69% identical to CUSA_ECOLI: Cation efflux system protein CusA (cusA) from Escherichia coli (strain K12)

KEGG orthology group: K07787, Cu(I)/Ag(I) efflux system membrane protein CusA (inferred from 78% identity to abo:ABO_1356)

MetaCyc: 69% identical to copper/silver export system RND permease (Escherichia coli K-12 substr. MG1655)
TRANS-RXN-90; TRANS-RXN0-280

Predicted SEED Role

"Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293Q381 at UniProt or InterPro

Protein Sequence (1052 amino acids)

>PfGW456L13_3708 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA (Pseudomonas fluorescens GW456-L13)
MIAALIRWSVANRFLVLLATLFLTAWGIWTVQSTPIDALPDLSDVQVIIRTPYAGQAPQI
VENQVTYPLATTMLSVPGARTVRGYSFFGDSFVYVLFEDGTDLYWARSRVLEYLSQVQSR
LPASAKPALGPDATGVGWIYQYALVDRSGGHDLAQLRALQDWFLKFELKTLPNVAEVATV
GGMVKQYQVQLDPLKLASFGITQAEVTDAIGKANQETGGAVLEMAETEFIVRASGYLKTL
NDFRAIPLKLGSDRVPVTLGDVATIQSGPEMRRGITELDGEGETVGGVVILRSGKNARET
IAAVKTKLDELKSSLPAGVEIVTTYDRSKLIDRAVENLSHKLIEEFIVVALVCGIFLWHL
RSSLVAIISLPVGVLAAFVVMRYQGINANIMSLGGIAIAIGAMVDAAVVMIENAHKKIEA
WHVANPGEELKGERHWHVMTEAAVEVGPALFFCLLIITLSFIPVFTLQAQEGRLFGPLAF
TKTYAMAAAAGLSVTLVPVLMGYWIRGRIPSEQQNPLNRWLIRIYQPALDAVLRRPKITL
LVALLVFVSALWPMSRLGGEFLPPLDEGDLLYMPSALPGLSAQKAAQLLQQTDRLIKTVP
EVEHVFGKAGRAETATDPAPLEMFETTIQFKPHEQWRAGMTQEKLVAELDGVVRVPGLTN
IWIPPIRNRIDMLATGIKSPIGVKVAGTNLAEIDAVTQAVERVAKDVPGVSSALAERLTG
GRYIDVDIDRKAAARYGLNIADVQSIVAGAIGGENVGETIEGLARFPINVRYPREWRDSL
GALERLPIYTPLGSQITLGTVAKVKVSEGPPMLKSENARPSGWVYIDVRGRDIASVVADL
RRVVNEQVRLQPGMSLSYSGQFEFLERANARLKLVVPATLLIIFVLLYLTFARFDEALLI
MATLPFALTGGAWFLYLLGFNLSVATGVGFIALAGVSAEFGVIMLLYLKNAWAEREDLGD
STERGLVAAIREGAVQRVRPKAMTVAVIIAGLLPILLGSGTGSEVMSRIAAPMVGGMVTA
PLLSLFVIPAAYRLMRRRHLLPAPTTHQGKVI