Protein Info for PfGW456L13_3472 in Pseudomonas fluorescens GW456-L13

Annotation: Bll0377 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 270 PF03737: RraA-like" amino acids 42 to 202 (161 residues), 108 bits, see alignment E=2.7e-35

Best Hits

KEGG orthology group: None (inferred from 44% identity to nca:Noca_0038)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QS23 at UniProt or InterPro

Protein Sequence (270 amino acids)

>PfGW456L13_3472 Bll0377 protein (Pseudomonas fluorescens GW456-L13)
MTQIHQYADTLEETDERQVHVSDEVLARLARCSSGSLTTQLFKLGFRQPALVGLRAMNKD
IKPFAGRAFTMRFIPAREDIDTYGTMTTKPNHNNLQWQGVEQIQPGDVLVIDSQNDPRAA
SAGNILVTRLLARGARAIVTDGALRDGSEIAALPLPAFAREVTATTRISYHHVADLQVPI
GCAGVAVYPGDIIVGDGDGLTVIPAHLAEELADYCTVQDDLEGYLAMRIAAGEALWGVYP
PGPTAISDYHAWVASGRPAIPSIINKGDEQ