Protein Info for PfGW456L13_3423 in Pseudomonas fluorescens GW456-L13

Annotation: Cytochrome P450

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 PF00067: p450" amino acids 59 to 405 (347 residues), 96.1 bits, see alignment E=1.1e-31

Best Hits

KEGG orthology group: None (inferred from 69% identity to gag:Glaag_0358)

Predicted SEED Role

"Cytochrome P450"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QWK3 at UniProt or InterPro

Protein Sequence (425 amino acids)

>PfGW456L13_3423 Cytochrome P450 (Pseudomonas fluorescens GW456-L13)
MSNESAALDLATAYSAVSEMYRGTDLDIHAVCREQRLKSPIYEGDFITQFGVPTNAGTQQ
GTRPTFALFKYQDVMTVLRDGATYTSGFIAEGLGAFFDGLIILAMDGDEHRKVRALLQPA
FMPETVNKWRPQIDQVIREEYIQPMLPAKKADLMKFGLELPIRIMYALMGFPSDEPSKYK
QYAAWALAIVGGNQIDPSKMVEARRQAGIAVKGLYDALAEVVVQRRAEGSQGDDVVGRLL
RAEYEGRTLDDHEVITFTRSLLPAAGETTTRMFGSVMTLLLTTPGLLERVKADRSLIGKL
MDETTRFEPVATFKVRETAKEVEFHGVKIPKGSFVQCMVVSANRDEDAFENPDVFDIDRK
PKPSFGFGFGPHMCIGQFVAKVEISCAVNAILDLFPNLRLDPTQPVPQIGGAQLRGVSTL
PVIWD