Protein Info for PfGW456L13_3392 in Pseudomonas fluorescens GW456-L13

Annotation: Cytochrome P450

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 PF00067: p450" amino acids 61 to 392 (332 residues), 112.2 bits, see alignment E=1.4e-36

Best Hits

KEGG orthology group: None (inferred from 71% identity to bxe:Bxe_C0599)

Predicted SEED Role

"Cytochrome P450"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QSF7 at UniProt or InterPro

Protein Sequence (425 amino acids)

>PfGW456L13_3392 Cytochrome P450 (Pseudomonas fluorescens GW456-L13)
MSTPVQSDLTKVFTDVASNYRGTSDIDLHATYSEMRANSPVLQDNFMARLGVPSIAGLDA
ERPTFTLFKYDDVMAVMRDAGTFTSGFIAEGLGAFFDGLILTAMDGDAHKSMRNLLQPVF
MPETVNRWKETRIDRVIREEYIKPMVPAKGGDLMDFALYFPIRVIYSLIGFPEDRPEQIE
QYAAWALAILAGPQVDPQKAAAARGAAMDAAQALYDVVKVVVAERRAAGASGDDLISRLI
GVEYQGRSLDDHEITTFVRSLLPAASETTTRTFGTLMALLLQNPDVLERVRNDRSLVNKA
IDEAVRFEPVATFKVRQAAKDLEIRGVPIPKGAMVQCIVTSANRDEDAFENADKFDIDRK
PKPSFGFGFGPHMCIGQFVAKTEINCALNAILDLMPNIRLDPDKPGPQIVGAQLRGPHYL
HVLWD