Protein Info for PfGW456L13_3150 in Pseudomonas fluorescens GW456-L13

Annotation: L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 372 TIGR01186: glycine betaine/L-proline transport ATP binding subunit" amino acids 47 to 335 (289 residues), 353.9 bits, see alignment E=5.1e-110 PF00005: ABC_tran" amino acids 54 to 201 (148 residues), 124.6 bits, see alignment E=9.2e-40 PF00571: CBS" amino acids 308 to 352 (45 residues), 26.8 bits, see alignment 1e-09

Best Hits

KEGG orthology group: K02000, glycine betaine/proline transport system ATP-binding protein [EC: 3.6.3.32] (inferred from 94% identity to pba:PSEBR_a3618)

Predicted SEED Role

"L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)" in subsystem Choline and Betaine Uptake and Betaine Biosynthesis (TC 3.A.1.12.1)

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.32

Use Curated BLAST to search for 3.6.3.32

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QPQ7 at UniProt or InterPro

Protein Sequence (372 amino acids)

>PfGW456L13_3150 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) (Pseudomonas fluorescens GW456-L13)
MTTPNIDTNEVLIDCQSVWKIFGKAAPAAMNAVVQQGLTKTQILQNYGCVVGVSDVSLQV
RRGEIFCIMGLSGSGKSTLIRLLNKLITPSAGKIVVKGKELSSLNAAQLREVRARHIGMV
FQSVALLPNRTVLENTAFGLEVQGVGKAERYKVAEQALAKVGLSDWMSRYPSELSGGMQQ
RVGLARAITADPEVILMDEPFSALDPLIRRQLQDEFRQLTKELGKSAVFITHDLDEAIRI
GDRIAIMKDGAIIQVGTAEEIVLNPADDYVAEFVAGISRLHLVRANSVMTPVESFKVANP
GCDIARLIKTSVDADINELIGLTMKSERDALAVVDNGVVVGIITPRDLLRGVQGIPNEFA
VSKAATALEAST