Protein Info for PfGW456L13_2900 in Pseudomonas fluorescens GW456-L13

Annotation: Pyoverdine chromophore precursor synthetase PvdL @ Siderophore biosynthesis non-ribosomal peptide synthetase modules

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 850 900 945 transmembrane" amino acids 192 to 211 (20 residues), see Phobius details amino acids 337 to 361 (25 residues), see Phobius details amino acids 440 to 442 (3 residues), see Phobius details amino acids 711 to 733 (23 residues), see Phobius details amino acids 746 to 763 (18 residues), see Phobius details amino acids 864 to 883 (20 residues), see Phobius details PF00550: PP-binding" amino acids 41 to 90 (50 residues), 31 bits, see alignment 3.8e-11 PF00501: AMP-binding" amino acids 131 to 530 (400 residues), 239.2 bits, see alignment E=1e-74 PF01553: Acyltransferase" amino acids 759 to 883 (125 residues), 100.9 bits, see alignment E=7.3e-33

Best Hits

KEGG orthology group: None (inferred from 51% identity to rfr:Rfer_2145)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QSL9 at UniProt or InterPro

Protein Sequence (945 amino acids)

>PfGW456L13_2900 Pyoverdine chromophore precursor synthetase PvdL @ Siderophore biosynthesis non-ribosomal peptide synthetase modules (Pseudomonas fluorescens GW456-L13)
MPRPPPETRAVPRCDGDAEKLLEIVRRTVVELRPQAAEGLQVTLHSVLDRDLGVDSLTRV
ELWSRIEHEFGVRLPENLFASADTPTDILRVLHSRHGAEAVRPLPSSNSSETLIATGQTP
DAARTLIEVLDWHVRQQPQHLHVRLLGESDQQEDISYGALHQGALAVAGGLQRSGLHAGQ
TVALMLPTGRDFLQGFFGILLAGGVPVPIYPPLRLSQIEDHLRRQAGILRNAEAKVLITV
TQAKLLARLLQPQVPSLTRIASVAELTGEGGECVTPPRQPDDIAFLQYTSGSTGQPKGVM
VSHANLLANLRAMGRALKVGPQDVFVSWLPMYHDMGLIGAWLGSLYYGYSLMLMSPLAFL
ARPARWLWAIDRFRGTLSAAPNFAYELCLNKLADGDLEGLDLSSWRLAFNGAEPVSPQTL
QRFAERFARYGLAPTALAPVYGLAEATLGVAFPPLDRGPLIDRVQRDAFQARGNALPVEA
DASAALRFVSSGRPLPGHQIRIVDGSGIELPERSEGHLQFRGPSTSAGYYRNPEETRRVL
RDGWFDSLDFAYMAGGEVYLTGRAKDLIIRAGRNIYPYDVEAAVGNLPGLRKGCIAVFGS
PEPATGTERLVVLAESYEKDAAARQQLQQEVNRIVFDLTGVAPDDIVLAPPHSVLKTSSG
KLRRAASRELYERGEVGRPHLAVWRQLLRLVLQALRGHFGRGWQTCRAVLYATYIWLLFW
LVTPLTWLVVAILPRQRWCRSFTRAASRLFLRLAGVPFSVTGLERLPSSSVSVLAANHAS
YLDGVILSAALPPQFSFVAKRELADQWIAGRFLRKLGARFVERFDLQRSAADTEPLAEAL
QAGQPLVFFPEGTFTREPGLRTFHMGAFVLAARAGVPLLPVAICGTRKVLRDGQWYPRHG
AIHVNVCPQLLADGPDWMEAIKLRDATIAVLLEHLDESERAQRPG