Protein Info for PfGW456L13_2835 in Pseudomonas fluorescens GW456-L13

Annotation: Strictosidine synthase precursor (EC 4.3.3.2)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 359 signal peptide" amino acids 1 to 29 (29 residues), see Phobius details PF20067: SSL_N" amino acids 42 to 85 (44 residues), 36.6 bits, see alignment 5e-13 PF08450: SGL" amino acids 81 to 269 (189 residues), 41 bits, see alignment E=2.6e-14 PF03088: Str_synth" amino acids 148 to 235 (88 residues), 70.2 bits, see alignment E=1.9e-23

Best Hits

KEGG orthology group: None (inferred from 83% identity to pfo:Pfl01_3130)

Predicted SEED Role

"Strictosidine synthase precursor (EC 4.3.3.2)" (EC 4.3.3.2)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 4.3.3.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QQX5 at UniProt or InterPro

Protein Sequence (359 amino acids)

>PfGW456L13_2835 Strictosidine synthase precursor (EC 4.3.3.2) (Pseudomonas fluorescens GW456-L13)
VSRTFKCLLLVIVVIGAFLLLMPTKVRPVAWTPQAAPSLTSGIYADNQRLKEVERVGAAN
IDGPEALLLENDTLITGLHDGRLIRTSLDGKTTSILTDTGGRPLGLARHPNGLLVIADAV
KGLLSLDAQGRLVALTTEADGVPFGFTDDVAIDKPGHYAYFSDASSRFGYGHDGEAVIEH
GGDGRLLRYDFQTGKTSVVLDKLEFANGVTLGPDDAYVLVNETGAYRITRYWLSGPKAGT
HDLFIDNLPGLPDNLSFNGHDRFWVALYAPRNSLLDATAAHPFVRKMIVRAMTVLPKPVE
KHGFALGLDLDGKVIANLQDGSSDNYSPITTVREYGDWLYFGSLKARNMVRLPLSKALQ