Protein Info for PfGW456L13_2805 in Pseudomonas fluorescens GW456-L13

Annotation: oxidoreductase, FAD-binding

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 464 signal peptide" amino acids 1 to 31 (31 residues), see Phobius details TIGR01679: FAD-linked oxidoreductase" amino acids 41 to 462 (422 residues), 459.2 bits, see alignment E=6.4e-142 PF01565: FAD_binding_4" amino acids 52 to 183 (132 residues), 76.5 bits, see alignment E=1.7e-25 PF04030: ALO" amino acids 208 to 459 (252 residues), 251 bits, see alignment E=1.6e-78

Best Hits

KEGG orthology group: None (inferred from 89% identity to pfo:Pfl01_2494)

Predicted SEED Role

"oxidoreductase, FAD-binding"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QPS7 at UniProt or InterPro

Protein Sequence (464 amino acids)

>PfGW456L13_2805 oxidoreductase, FAD-binding (Pseudomonas fluorescens GW456-L13)
MTMDLTRRQLLQRASVIGAFTALGSTPALAELLRAPRLIPWRNWSGGQSCLPAARLAPKN
LDELTQVVRQAPGKIRPVGSAHSFSALVPTDGTLLSLSYFTGLLDHDAKTLQAEFAAGTP
MSRMGTPLKDIGQALQNMADIDYQTLAGAISTSTHGTGKDFQSYSAHVCGLQLVVANGDV
LDCDASRHPEVFSAARVSLGALGVATRVRLQNRPAYRLRERQWIAKTEELLEDLDKNTRE
NQHWEMLVVTHSDYALSIALNETGDPATPPVPADEEGGNEFVTLIEKIDKYASDFPDLRR
TMLNNLRHLASFDDRVGDSFDIYANVRTVRFNEMEYSVPAEYGPACLREILKLIQDKDLR
TWFPIEYRYVKADDIPLSMFEGRDSCSISVHQHYQMDHHNFFAAIEPIFWKYNGRPHWGK
LHTLNAKNLQSLYPRWQEFIQVRQALDPSGKFLNAHLSSILGVS