Protein Info for PfGW456L13_2602 in Pseudomonas fluorescens GW456-L13

Annotation: putative exported protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1212 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details PF04357: TamB" amino acids 887 to 1212 (326 residues), 189.5 bits, see alignment E=6.1e-60

Best Hits

KEGG orthology group: K09800, hypothetical protein (inferred from 85% identity to pfo:Pfl01_3646)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QKB7 at UniProt or InterPro

Protein Sequence (1212 amino acids)

>PfGW456L13_2602 putative exported protein (Pseudomonas fluorescens GW456-L13)
MAALLAVVVLTLATVLGTATGSRWALGFVPGLTLENFQGRLGGQWSADRVLWQQESNRVE
LSKVIFAWSPLCLTRMTLCIEQLQADQVSLTFPPGAEEPDSGPITLPELKLPLALELGEI
KVGSLLFNGSEELKGLQLAAHWTTAGLKIDAVSLQRDDLSLNLSGLLQPSGNWPLSASGK
LTLLSTPEPLALALKVDGDLLKTLNLNADSSGYLNGQLTGELQPLVENLPAKVRITADGF
KPSAEMPDTLQLNQLELTGAGDLKNGYALLGKATLPAEQGPVTLALQGKVDAKGAQIAAL
DLTANDKQSLKLTGQLDWSKGLSAEAKIDWLDFPWHRLYPLIDEPQVALRTFTGEVSYTD
GKYLGHFAAAADGPAGAFTLASPFAGDLTKIYLQQIQLQAGQGKAEGHLNLQFADGIAWD
TALDLSAINPAYWVAELPGTLAGPLRSTGEMKNEVLSLNADLDLKGKLRGQPAVIQAKAD
GRGEQWNLNTLQVRLGDNSISGKGSLQQKLAGQIDLKLPRLAQLWPQLRGQLNGRVDVAG
TLKAPQGKLDLQGSQLAFQDHRLQSLNLDATLDSAQRAKVDLKGSGIRAGDTLLGTLTAS
GHGDIKNQKLNLDLQGPKLKLALGLDGALDKGNWRGRLASGDIQAGGQDWKLQGPAKLER
LADGKITFGAHCWASGQASLCGEDARLMPEPKLRYHLKQFPIDSLAQWLPKDFAWQGRLN
ADLQLDLPASGPNGQVSVDAGGGTLRIKDKDQWLDFPYQTLKLTSKLTPKRIDTELNFVG
GKLGELMVQAQLNPLPKNKPLSGSFRLSGLDLSVARPFVPMVEKLTGRLNGSGTISGGLL
APQVNGSLQLSDGQISGPELPMELKNLHLQALIAGESVQLNGGWDSGKAGHGSLNGNVAW
GQALVVDLALKGSQLPVTVEPYAKLEVAPDLKISMKGDELAIAGKVLVPRGDITIRELPP
STVKVSDDTVIVGQQTEEGKPPLAMKMDIEVLVGEDKLSFAGFGLTANVQGHVHIGDNMD
TRGELWLNDGRYRAYGQRLSVRRARLLFAGPIDQPYLDIEAIRKTDDIIAGIRLSGSAEQ
PTTQIFSEPAMSQEQALSYLVLGRPLSSNGEDNNMLAQAALGLGLMGSSGVTSGIAKNLG
IQDFQLDTQGSGDATSVVASGNISEKLSLRYGVGVFEPANTIALRYKLSKRVYLEAAGGV
ASSLDIFYKRDF