Protein Info for PfGW456L13_248 in Pseudomonas fluorescens GW456-L13

Annotation: FIG025233: SAM-dependent methyltransferases

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 241 PF13489: Methyltransf_23" amino acids 26 to 189 (164 residues), 56.1 bits, see alignment E=1.1e-18 PF01209: Ubie_methyltran" amino acids 43 to 154 (112 residues), 39.4 bits, see alignment E=1.4e-13 PF13847: Methyltransf_31" amino acids 50 to 174 (125 residues), 71.4 bits, see alignment E=2.2e-23 PF08241: Methyltransf_11" amino acids 51 to 148 (98 residues), 88.4 bits, see alignment E=1.2e-28 PF08242: Methyltransf_12" amino acids 51 to 146 (96 residues), 55.8 bits, see alignment E=1.9e-18 PF13649: Methyltransf_25" amino acids 51 to 144 (94 residues), 77.2 bits, see alignment E=3.8e-25

Best Hits

KEGG orthology group: None (inferred from 85% identity to pfo:Pfl01_0427)

Predicted SEED Role

"FIG025233: SAM-dependent methyltransferases"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QDV6 at UniProt or InterPro

Protein Sequence (241 amino acids)

>PfGW456L13_248 FIG025233: SAM-dependent methyltransferases (Pseudomonas fluorescens GW456-L13)
MNYLSDNYVEETRFGLWFLRSQIWQHYVLRLAINDLHNLFSEALPVSPVLLDAGCGQGKS
FPLLRQAFAPGRLIGVDADPQSLIQSREEAARQGMEVELIGGDCASLNLPDASIDLLFCH
QTFHHLVEQEQALAEFYRVLKPGGYLLFAESTEAYIDTWVIRWLFRHPMHVQKSAAQYLQ
MIRRQGFEFTAQNVSYPYLWWSRAKDFGLLEYLGVCKPKPFGQREETLVNVVARKPFEGT
E