Protein Info for PfGW456L13_2471 in Pseudomonas fluorescens GW456-L13

Annotation: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 162 PF00571: CBS" amino acids 33 to 79 (47 residues), 37.1 bits, see alignment E=1.7e-13 amino acids 91 to 143 (53 residues), 53.6 bits, see alignment E=1.1e-18

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfo:Pfl01_3735)

Predicted SEED Role

"Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)" in subsystem Purine conversions (EC 1.1.1.205)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 1.1.1.205

Use Curated BLAST to search for 1.1.1.205

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QME5 at UniProt or InterPro

Protein Sequence (162 amino acids)

>PfGW456L13_2471 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (Pseudomonas fluorescens GW456-L13)
LRLRFFKNNDNTRVTTMKTVAQLLKLKDQKNQEVHQIKPDHMVLEALMKMAEKNVGALLV
VENDEVLGIISERDYARKLVLHGRSSVGTPVRDIMVSPVITVDTHQTVDTCLGIMSDRRL
RHLPVVEGGKLIGLLSIGDLVKEAIAEQAELIRQLEQYIRGE