Protein Info for PfGW456L13_2325 in Pseudomonas fluorescens GW456-L13

Annotation: Major facilitator family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 433 transmembrane" amino acids 20 to 41 (22 residues), see Phobius details amino acids 47 to 71 (25 residues), see Phobius details amino acids 83 to 103 (21 residues), see Phobius details amino acids 109 to 135 (27 residues), see Phobius details amino acids 148 to 170 (23 residues), see Phobius details amino acids 182 to 202 (21 residues), see Phobius details amino acids 236 to 260 (25 residues), see Phobius details amino acids 267 to 290 (24 residues), see Phobius details amino acids 302 to 321 (20 residues), see Phobius details amino acids 327 to 350 (24 residues), see Phobius details amino acids 364 to 387 (24 residues), see Phobius details amino acids 394 to 416 (23 residues), see Phobius details PF00083: Sugar_tr" amino acids 13 to 223 (211 residues), 85.8 bits, see alignment E=3.2e-28 PF07690: MFS_1" amino acids 15 to 375 (361 residues), 95.8 bits, see alignment E=2.5e-31

Best Hits

KEGG orthology group: None (inferred from 94% identity to pfo:Pfl01_3901)

Predicted SEED Role

"Major facilitator family transporter"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QMI3 at UniProt or InterPro

Protein Sequence (433 amino acids)

>PfGW456L13_2325 Major facilitator family transporter (Pseudomonas fluorescens GW456-L13)
MHTTPQPRRAAAAAFIGTTIEFYDFYIYATAAALVLGQVFFPSSDPVMSTLAAFGSFAVG
FIARPMAGMVFGHLGDRLGRKKMLLVTMALMGVATAGIGLLPSYASAGIWAPIGLIVLRV
IQGISVGGEWGGAVLMASEHAPAKRKTFYASFAQLGSPAGLLLALIAFRLVTSLEPEDFL
AWGWRLPFLASGVLMMVGLLIRSGVHESPEFAKAKDNNETAKYPVMDVIRTCWRQILFAA
AAVTIGSAGFFFTNTFMITYVTQYQGIARSTILDCLFLVTVIQLLSQPLSALIAERIGEG
RFLKWVALLCMVTPYPMFLLVGTQNIVFMTAGIALAVVILSALYAVIAGYMTQAFPVHLR
YSGISIAYQLACAVAGGTTPLIGTLLASKFSGQWLPLAVFFTLLSALSLIGVCGLARLRA
NPVVTHAAKEVYS