Protein Info for PfGW456L13_2197 in Pseudomonas fluorescens GW456-L13

Annotation: Ethanolamine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 454 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 36 to 60 (25 residues), see Phobius details amino acids 87 to 112 (26 residues), see Phobius details amino acids 124 to 143 (20 residues), see Phobius details amino acids 149 to 170 (22 residues), see Phobius details amino acids 185 to 207 (23 residues), see Phobius details amino acids 227 to 248 (22 residues), see Phobius details amino acids 276 to 299 (24 residues), see Phobius details amino acids 328 to 346 (19 residues), see Phobius details amino acids 353 to 376 (24 residues), see Phobius details amino acids 395 to 415 (21 residues), see Phobius details amino acids 421 to 439 (19 residues), see Phobius details TIGR00908: ethanolamine permease" amino acids 2 to 448 (447 residues), 614.2 bits, see alignment E=6.9e-189 PF13520: AA_permease_2" amino acids 9 to 413 (405 residues), 136 bits, see alignment E=1.8e-43 PF00324: AA_permease" amino acids 17 to 420 (404 residues), 118.4 bits, see alignment E=3.5e-38

Best Hits

KEGG orthology group: None (inferred from 96% identity to pba:PSEBR_a1585)

Predicted SEED Role

"Ethanolamine permease" in subsystem Ethanolamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QN43 at UniProt or InterPro

Protein Sequence (454 amino acids)

>PfGW456L13_2197 Ethanolamine permease (Pseudomonas fluorescens GW456-L13)
MNTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGVAGTLGFLVTSFMVATMYTCFIFSF
TELTTAIPHAGGPFAYSRRAFGEKGGLIAGLATLIEFVFAPPAIALAIGAYLNVQFPALD
PKHAAVGAYLVFMGLNILGVKLAATFELVVCVLAVAELLVFMGVVAPAFSFSNFALNGWA
GSDVFGAPAIAGMFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPKAYISGILTLVLLAM
GVMFFAGGVGDWRTLSNINDPLPQAMKTVVGESSGWLHMLVWIGLFGLVASFHGIILGYS
RQFFALARAGYLPASLARLSRFQTPHRAIIAGGVIGIAAIYSDSLINLGGMTLTAAMITM
AVFGAIVMYIMSMLSLFKLRKTEPNLERTFRAPCYPLVPFIALMLAVVCLVAMAWFNTLI
GLIFLGFMAAGFLYFMLTAQLRADAPADAMLTGH