Protein Info for PfGW456L13_2064 in Pseudomonas fluorescens GW456-L13
Annotation: Predicted ATPase with chaperone activity, associated with Flp pilus assembly
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 91% identity to pba:PSEBR_a4093)Predicted SEED Role
"Predicted ATPase with chaperone activity, associated with Flp pilus assembly" in subsystem Widespread colonization island
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Compare to protein structures
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A293PZ12 at UniProt or InterPro
Protein Sequence (442 amino acids)
>PfGW456L13_2064 Predicted ATPase with chaperone activity, associated with Flp pilus assembly (Pseudomonas fluorescens GW456-L13) MHVIVESDAYPSDRGAVQRLAPQPCTIRETGLTDSFLGELVCKHLFDAGVLDMSRLVERL ALTGAVLEEVLAFLRKDGRVEVLGQVSQTGGQMLRYGLTERGRSAARDALSRSGYIGAAP FPVSTYRSLIKLQTIHHGRINANDMRNALAGVVLTEEMLDQLGVAMNSGRAIMIYGPAGT GKTYVSSRLIRLFAEAIWVPHAIVINESVIEIYDPQVHQRLDDNAQQNTLMLNEGIDRRL LCCKRPIVITGGELSMEQLDVRYDPFTRQYQAALQLKASNGLFIIDDMGRQRMAPAELFN RWIVPMEEKRDFLNLGGGRHCELPFDLILVFSTNLNPLELADEAFLRRIGYKLQFGYLKP EQYEKIWRQESERLGISYDPLLVRYVLQRLYASEGMPLVPCHPRDLLNMALDRQRYIGGS GPLSPKELEWAWHNYFVQLDFL