Protein Info for PfGW456L13_194 in Pseudomonas fluorescens GW456-L13
Annotation: Cation transport ATPase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 92% identity to pfo:Pfl01_0485)Predicted SEED Role
"Cation transport ATPase"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A293QDN1 at UniProt or InterPro
Protein Sequence (321 amino acids)
>PfGW456L13_194 Cation transport ATPase (Pseudomonas fluorescens GW456-L13) MSRTLIRKNPSNFKTLPLFVEATPEGLAYQSVGRPLNFSQTLQRRRPVTVGDSERFALEL ANLGVSVRLTLHWQNRDYWVLVRQRRQDRGDVVLKLISGYVPAHELNLPLHTAIQEIAEE CLLETPEGWLGGRFNDTWLPAPYSAALHYREALPFRLSPLSGSARPVRCANLMLMERPRA YVHLPTASLQLIYDLRLDVPKEAKSLSLFHVDERLEGDQLVARLDRKRPDLYLMPLQDGH PMAELYTLKKDQLCPASTRGLYLAESFARQEGWLVRDERIRWKDWVRQQGLTPPGKDSGL ARLRGKAKLLLKKIVPRKAAR