Protein Info for PfGW456L13_1341 in Pseudomonas fluorescens GW456-L13

Annotation: Ethanolamine permease

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 457 transmembrane" amino acids 12 to 32 (21 residues), see Phobius details amino acids 43 to 63 (21 residues), see Phobius details amino acids 90 to 114 (25 residues), see Phobius details amino acids 126 to 147 (22 residues), see Phobius details amino acids 152 to 175 (24 residues), see Phobius details amino acids 191 to 210 (20 residues), see Phobius details amino acids 230 to 251 (22 residues), see Phobius details amino acids 282 to 302 (21 residues), see Phobius details amino acids 331 to 349 (19 residues), see Phobius details amino acids 356 to 379 (24 residues), see Phobius details amino acids 397 to 416 (20 residues), see Phobius details amino acids 422 to 440 (19 residues), see Phobius details TIGR00908: ethanolamine permease" amino acids 6 to 452 (447 residues), 629.4 bits, see alignment E=1.8e-193 PF13520: AA_permease_2" amino acids 12 to 418 (407 residues), 143.8 bits, see alignment E=8e-46 PF00324: AA_permease" amino acids 20 to 423 (404 residues), 120.5 bits, see alignment E=8e-39

Best Hits

KEGG orthology group: None (inferred from 97% identity to pfo:Pfl01_4990)

Predicted SEED Role

"Ethanolamine permease" in subsystem Ethanolamine utilization

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293QM24 at UniProt or InterPro

Protein Sequence (457 amino acids)

>PfGW456L13_1341 Ethanolamine permease (Pseudomonas fluorescens GW456-L13)
MTISSTQLKPTLGTLHLWGIAVGLVISGEYFGWSYGWGTAGTLGFLVTALMVATMYTCFI
FSFTELTTAIPHAGGPFAYSRRAFGEKGGLIAGIATLIEFVFAPPAIAMAIGAYLNVQYP
ELDPKIAAVGAYFVFMGLNILGVSIAATFELVVTVLAVAELLVFMGVVAPGFSFSNFVLN
GWSGSNEFTMGSIPGIFAAIPFAIWFFLAIEGAAMAAEEAKDPKRTIPRAYVSGILTLVF
LAIGVMVMAGGVGDWRQLSNINDPLPQAMKAVVGDNSTWMHMLVWIGLFGLVASFHGIIL
GYSRQFFALARAGYLPKGLAKLSRFQTPHRAILAGGVIGIAAIYSDGLVNLQGMSLTAAM
ITMSVFGAIVMYIISMLSLFKLRKTEPNLERTFRAPGYPIVPGIALFLAVVCLVAMAWFN
TLIGLVFLGFMVAGYLYFQLTAKQRSEAPADAMLEGI