Protein Info for PfGW456L13_1026 in Pseudomonas fluorescens GW456-L13

Annotation: Signal transduction histidine kinase CheA (EC 2.7.3.-)

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2006 PF01627: Hpt" amino acids 10 to 100 (91 residues), 28 bits, see alignment 5.4e-10 amino acids 629 to 704 (76 residues), 47.3 bits, see alignment (E = 5.1e-16) amino acids 770 to 854 (85 residues), 45.8 bits, see alignment (E = 1.5e-15) amino acids 1110 to 1201 (92 residues), 48.3 bits, see alignment 2.5e-16 amino acids 1252 to 1352 (101 residues), 51.6 bits, see alignment 2.3e-17 PF02895: H-kinase_dim" amino acids 1401 to 1459 (59 residues), 23.8 bits, see alignment (E = 1.2e-08) PF02518: HATPase_c" amino acids 1588 to 1724 (137 residues), 57.8 bits, see alignment 3.6e-19 PF01584: CheW" amino acids 1730 to 1859 (130 residues), 80.3 bits, see alignment 2.7e-26 PF00072: Response_reg" amino acids 1887 to 1998 (112 residues), 95.8 bits, see alignment 4.6e-31

Best Hits

Predicted SEED Role

"Signal transduction histidine kinase CheA (EC 2.7.3.-)" in subsystem Bacterial Chemotaxis or Flagellar motility or Two-component regulatory systems in Campylobacter (EC 2.7.3.-)

Isozymes

Compare fitness of predicted isozymes for: 2.7.3.-

Use Curated BLAST to search for 2.7.3.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A293PXG5 at UniProt or InterPro

Protein Sequence (2006 amino acids)

>PfGW456L13_1026 Signal transduction histidine kinase CheA (EC 2.7.3.-) (Pseudomonas fluorescens GW456-L13)
MGDRHDYVALEWVKGEIAETLKQAHHAIENLLDDPQATQALDASLSCIHQVHGSLQMVEF
YGAALLAEEMEQLAMALQGNRVSHRDEALHLLMQALGQLPIYLDRVQGARRDLPLVVLPL
INDLRSARGESLLSETSLFSPQLPELPALDAQALTQLEPAELPSVLRKLRQMLQMALVGF
LREQDNDTNLDYLAKVFTRLEALCDNAPLSPLWQVASALVEGMQGGAIANSPALRSLFKD
ADKELKRLLEQGMPGINQPAPPELLKSLLFYIAKAEHPTGQMLTMKERYSLDDALPDSVM
VDEERARLAGPDRDAMRSVLAALCEELVRVKERLDLFVRSDRQHTSDLDSLLAPLRQIAD
TLAVLGFGQPRKVIIDQLAVVLSLAQGQREPNDAILMDVAGALLYVEATLAGMVGTVEPE
SQDDNRLPTTDLTQIHQIVIKEARICLQQAKDMIVDYIDADWDRQHLQALPALLTQVRGA
LAMIPLSRAASLVETCNHFIREHLLLEPGQPGWQELDSLADVITSIEYYLERLGDDPQAQ
GENLLDVAEKSLANLGFFPSEQHVPVLDDVLKPTQAQVMQMMQELENPQVVQTLADVLAS
PVSTLNPPALNTPGSLLPPPAGEEPVDEELREVFLEETDEVLEILRDYLPRWSANPDNRS
ALSELRRAFHTLKGSGRMVRALVLGELAWAVENLLNRVLENSVEPGATVQQLIGDVLHLL
PELVAEYAANAQRQRNDVDQLAARAHALAKGDEPVSDEDTQDVAALDPLLLEIFRKEAET
HLGSLNRFLDQAAEHVPLQASDELQRALHTLKGSASMAGVLPIAELAAPLDQLAREYKAH
LIALDLDEVELLLEAEGLFRLGLRQLKRDPLAEIPGARGLTERARAQLAERLENLLSTPN
TGLRIKRDPQLINNFLAQGMDILLDAESLLQRWQQHPGERQELSALLDELTTLGEGAHLA
DLHPVDELCEALLDLYGAVEESSLAVSERFFHEAQGAHEALINMLDELAAGQEVSPQPQR
IRALRELLDESLDPSAMGLIRSDGSRSLSIRELGSATEELERTLPPAPVGASSLAMDSNA
PRLSNDNASSLTPIASGLAPTGEGRELDDEIVAIFLEEAVDILESAGQALQRWLRDSDNA
APLSSLQRDLHTLTGGARMAGVGPVGDLAHELESLYQGLVDRRYAFSDSLAVLLKQSHER
LALYLEQLQLNQPLDDSRELIEAIRAYRQGHAGIAEGARQATGSDAAAHDTELLEIFLEE
GFDIIESSGAALERWQAQPSSRQEVETLLRDLHTLKGGARMVEIAAIGDLAHELEFLYEG
LSTGVLQPTEPLFALLQRSHDRLAQMLDAARAGEPMPPADRLIDAIKNFSHPAVPETPAS
VAPSATPKPEPLAPPSDAGADMVKVSAELLDDLVNLAGETSIFRGRIEQQVNDAHIALNE
METTIERMRDQLRRLDTETQGRILSRQQVEAERLGYEEFDPLEMDRHSQLQQLSRALFES
ASDLLDLKETLERRNQDTENLLQQQGRINTELQEGLMRTRMVPFERMLPRLQRIVRQVSS
ELGKDVDFIVDNAEGEMDRSVLERMAAPLEHMLRNAVDHGLESVEVRLAAGKPAKGKITL
DLLREGGDIIFDIRDDGAGVPLDAVRRKAIKRGLLAPDSIISDHDVLQFILQPGFSTAEK
ITQISGRGVGMDVVHEEVRQLGGTMSIDSVPGQGVHFRIRLPFTVSVNRALMVQCGEDQY
AIPLNTIDGIVRVLPNELEGYFRFDSPTYEYAGQHYELCYLGELLKTSPRPKLLGQSLPL
PVLLVQCNERHIAVLVDAMAGTREIVVKSLGPQFAAVQGVSGATILGDGRVVLILDLLAP
IRAMQARVPQRPAGQEVEAEPHRPLLVMVVDDSVTVRKVTSRLLERHGMSVLTAKDGVDA
MLLLEEHMPDLMLLDIEMPRMDGFEVATQVRNDERLQHLPIIMITSRTGQKHRDRAMAIG
VNDYLGKPYQESVLLESIALWSKTHA