Protein Info for PP_2852 in Pseudomonas putida KT2440

Annotation: putative Sulfatase domain protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 733 transmembrane" amino acids 12 to 30 (19 residues), see Phobius details amino acids 36 to 52 (17 residues), see Phobius details amino acids 59 to 82 (24 residues), see Phobius details amino acids 108 to 128 (21 residues), see Phobius details amino acids 142 to 157 (16 residues), see Phobius details PF00884: Sulfatase" amino acids 225 to 500 (276 residues), 139.7 bits, see alignment E=6.6e-45

Best Hits

KEGG orthology group: None (inferred from 100% identity to ppu:PP_2852)

Predicted SEED Role

"sulfatase domain protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q88IZ7 at UniProt or InterPro

Protein Sequence (733 amino acids)

>PP_2852 putative Sulfatase domain protein (Pseudomonas putida KT2440)
MKNLSDHPSTRLATLAALVLVIPLGTRAMLGWSNPFGYLSDLALGSLLIVLLHRRPWWLA
LPVLLAWAALWVASAELVSAVGRLPTSADLNYLTDPQFMENSTGGGLAHAWLPWALGGGL
LAWLAFAWRSRARRSQPLPRKAWAIPVLLFGAHWGSQQLLPSDADQWRQYNLPHQLMSAG
VGNLQRQVEGWMGHTQTFTPLASSGLTQSDLHGQRLLAGPGSARNLLVITLEGIPGAYLR
PNRQALNSHFNEDLMPKLSKWAERGMNTPDYVLHTHQTIRGLYAMLCGDYDKLANGTPKG
VELLTQNQRNQACLPAQLRQAGFTTHYLQGAGLRFMAKDRIMPHIGFDAVHGQEWFSNKN
YLHFPWGKDDRAFFEGALGYVGQLQKQDKPWMLTLLTVGTHQPYSAPAEYLERFDTPKQA
AVAYLDDAVGAFLDNLERQGVLKDTLVVVTSDESHGIDGVRLASSWGFNLTLAPEQAQLP
TIKRGTYGHIDLATSLLDYFALPIPVALGGRSLYRDYDSGREMISYTNGMLRYHNGQGLF
TECDFQQRCRRYASEGFIADQARYLGPADSLLGQQIGALAVVLDQSLLQTPLNLRYQFGG
PSPIKLRKRIDDDWADNLIGAQYLEMPGGSHTRVRVKVRSLDPKRAAYIRLKAKQLEQDV
PLGLPEEVKVTTDAPLEMEFSFDNPTERKAFSFHLLGYGGGKVEVSDFSVITALPGEDDG
ADERAEGHIAQSG