Protein Info for PP_1780 in Pseudomonas putida KT2440

Annotation: putative mannosyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 100 200 300 400 500 600 700 800 900 1000 1100 1200 1300 1400 1500 1603 transmembrane" amino acids 965 to 981 (17 residues), see Phobius details PF13489: Methyltransf_23" amino acids 26 to 159 (134 residues), 48.6 bits, see alignment E=3.1e-16 PF07021: MetW" amino acids 38 to 101 (64 residues), 21.6 bits, see alignment (E = 6e-08) PF13649: Methyltransf_25" amino acids 44 to 133 (90 residues), 39.9 bits, see alignment 2.3e-13 PF08241: Methyltransf_11" amino acids 45 to 137 (93 residues), 41.8 bits, see alignment 5.8e-14 PF20706: GT4-conflict" amino acids 596 to 716 (121 residues), 40.2 bits, see alignment 8.4e-14 PF00534: Glycos_transf_1" amino acids 603 to 719 (117 residues), 36.2 bits, see alignment 1.8e-12 amino acids 1416 to 1557 (142 residues), 85.4 bits, see alignment E=1.4e-27 PF13692: Glyco_trans_1_4" amino acids 606 to 728 (123 residues), 44.3 bits, see alignment 9.2e-15 amino acids 1416 to 1556 (141 residues), 60 bits, see alignment E=1.3e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to ppu:PP_1780)

Predicted SEED Role

"mannosyltransferase, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q88LZ6 at UniProt or InterPro

Protein Sequence (1603 amino acids)

>PP_1780 putative mannosyltransferase (Pseudomonas putida KT2440)
MKKPFYRAFEDRYRGSTKLITERLQVYMPFLHPLLALDDEHRAIDLGCGRGEWLGVLAGE
GFNAVGVDLDDGMLEQCRIEGYAVENADAVAKLKSLADASQVLVSGFHIAEHVPFPVLQQ
LVGQALRVLKPGGLLILETPNAENLMVGTNSFYLDPSHEKPIPNLLLSFLAEYEGFGRSK
LVRLQELSPLPAHEDMRLLNVLSGVSPDYAVIAQKDAPEPTLSAFASAFDAEYGVTLEDL
AERYEERLASNFQQVGESVESCHSALSQVNLELGQHQAALVDLSQEVERHRAELESLKQV
VNGLNHHLSDTQQRLALADERMAATQAWIDKQQAKSLVAIVKRTARPLAIRMIRSVLGNQ
VLRHNANQLLRKFPKLHHQLKLFAQNRGLIGGGAFASAAMGHVGFQAVDYSRVSFAVYPK
APLLPEGYYLKDEAVAPAFNAVRITGHIEGHYSLAIVNRGLGVALFDMLEGKLAFQPYHG
KAYDNVIEIPAFQQRLTNAIGQPLDEALEGEVLSIVHHYPMIKDLKGAGMRLVIFFWEET
AIPYETISFINENFDAVIVAASFVKKVLHDSGCEVPVVICPVGVDHIITNEVAPITDIRP
AAGQRFRFLHVSSMFERKGPDVLLEAFAEAFSSADNVELYIKTFPNPHNRVHELIANLSA
DRQDMPSIVVDESPMDDQGIIALYRSAHTLVLPTRGEGFNLPAAEALAMGLPVIVTGFGA
HVDFCTLGTAELLPFLFAKSGSHLGAANSCWVEPDKHTLALKMGELRGKIVEGDDALEQR
RRQGIELVRSIYTWEQSAQAVLASANWLKHEMPAAAASKTKLVVVSPWATKCGIAEYTQA
LLSEFKQDDYDVRIYCDERTTDTTSDVYQPAWRLSDAKSMCKVLANEGCADADVVLVQHQ
PSLFALNDEVCERLAHLHDQGKVVVLELHSTQPLITDHRLSERAVRSLHKLDRIIVHKPE
DLNNLLVLGLAANVMMMAHGVISPLTDVQPADVRDELGIAQDDLVISCFGFILAHKGIDT
LIETILPLAQETGRNVHMLGLHSILDARSEQTLDAYRARAVELGVDDKITWVTDFRPIKE
CLRLMSAADYVIFPYKETQESASGAVTIGITTLKPVLVSPIHIFSDMAEATLQMTGSHAA
DIVASIAELERNPDKAQALVARQERWIDDRSWERVSARLSATVQALLFENNHLAPIVEKH
RRLSPGISPAAPKKLLVDVSELYFRDAKTGIQRVVKRVINEFQRGEGVDYQVIPVFGVTG
KGYRVASGYPGSSAYVASLSECPIEYSAGDVFLGLDLSAHLFPEFDGELERMRRAGVGIH
FVVYDLIPLLHSRFAYPGIDGAFNNWMRSISQYADGVVAISAAVAADVKVWLQQHGGGRV
MPSISHFHLGADIEEVQGQGSSTLEDTFIDQLKAVPTFLMVGTLEPRKGHAQTLAAFDVL
WAQGVELNLVLVGKEGWAVEQLVQHLRAHPQLGKRLFWLQGLSDADLTELYSASCALIAA
SEAEGFGLPLIEAAQHKLPIIARDIPVFREVAGEFAYYFQGVSADELAHAMKQWLELFEQ
GAQPLSDEMPWLHWSESAAELKRLVLDVTENTQLKHKAPAQAH