Protein Info for PP_0820 in Pseudomonas putida KT2440

Annotation: GCN5-related N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 187 PF13302: Acetyltransf_3" amino acids 17 to 157 (141 residues), 111.8 bits, see alignment E=6.7e-36 PF13420: Acetyltransf_4" amino acids 21 to 171 (151 residues), 29.8 bits, see alignment E=8.7e-11 PF00583: Acetyltransf_1" amino acids 56 to 156 (101 residues), 38.3 bits, see alignment E=2.2e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to ppf:Pput_0843)

Predicted SEED Role

"Ribosomal-protein-L7p-serine acetyltransferase" in subsystem Ribosome biogenesis bacterial

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q88PM9 at UniProt or InterPro

Protein Sequence (187 amino acids)

>PP_0820 GCN5-related N-acetyltransferase (Pseudomonas putida KT2440)
MTPPRSFPSDLCLDSPRLQLRPMRHADAAQWLAIMADPEVMRYWHHAPWQDLAEAESALA
ADREAYANGDQLKLGMYRRDNGELIGMVQLFNIDDISRRGEIGYCLASAVQGRGYMDEAL
TCFIDYLAHTLHMRRLEGEIDPRNQGSARTLERQGFVLEGTLRARWCVAGELSDSGIYGL
LLEPPVA