Protein Info for PFR28_05147 in Pseudomonas sp. RS175

Annotation: Azurin

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 148 signal peptide" amino acids 1 to 21 (21 residues), see Phobius details PF00127: Copper-bind" amino acids 21 to 148 (128 residues), 98 bits, see alignment E=1.8e-32 TIGR02695: azurin" amino acids 23 to 147 (125 residues), 204.5 bits, see alignment E=2.7e-65

Best Hits

Swiss-Prot: 85% identical to AZUR5_PSEPU: Azurin from Pseudomonas putida

KEGG orthology group: None (inferred from 88% identity to pba:PSEBR_a564)

Predicted SEED Role

"Azurin"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (148 amino acids)

>PFR28_05147 Azurin (Pseudomonas sp. RS175)
MFAKLVAVSLLTLASSQLMAAECKTTVDSTDQMSFSTKAIEIDKSCKTFTVELKHTGKLP
KNVMGHNWVLSKDTDMQPIATDGLSAGVDKNYLKDGDARIIAHTKLIGGGETDSVTFDVS
KLKADEKYGFFCSFPGHISMMKGTVTLK