Protein Info for PFR28_00931 in Pseudomonas sp. RS175

Annotation: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 349 transmembrane" amino acids 6 to 25 (20 residues), see Phobius details amino acids 46 to 64 (19 residues), see Phobius details amino acids 70 to 90 (21 residues), see Phobius details amino acids 102 to 119 (18 residues), see Phobius details amino acids 127 to 149 (23 residues), see Phobius details amino acids 159 to 177 (19 residues), see Phobius details amino acids 183 to 201 (19 residues), see Phobius details amino acids 212 to 230 (19 residues), see Phobius details amino acids 236 to 255 (20 residues), see Phobius details amino acids 286 to 308 (23 residues), see Phobius details amino acids 314 to 332 (19 residues), see Phobius details PF00953: Glycos_transf_4" amino acids 75 to 227 (153 residues), 126.9 bits, see alignment E=3.9e-41

Best Hits

KEGG orthology group: K13007, Fuc2NAc and GlcNAc transferase [EC: 2.4.1.-] (inferred from 63% identity to pau:PA14_23460)

Predicted SEED Role

"Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-)" in subsystem Methicillin resistance in Staphylococci or Teichoic and lipoteichoic acids biosynthesis (EC 2.7.8.-)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.4.1.-, 2.7.8.-

Use Curated BLAST to search for 2.4.1.- or 2.7.8.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (349 amino acids)

>PFR28_00931 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase (Pseudomonas sp. RS175)
MQLLFILIVTVSASVLFTWLLRFYAVHQSILDVPNLRSSHTQPTPRGGGIAIFLSFLLAM
IMLVSNSSLAWSSAWVILGAGGGAALIGFFDDHRHISVRWRLLGHFLCAMWALFWSGGLP
PLEVFGFVLDFGWSGHVLAVLYLVWILNLYNFMDGIDGIASVEAICSCLGACILYWGAGF
DGLIVVPLVLVMAVAGFLYWNFPPARIFMGDGGSGFLGLTLGVISLQAAWVSPEFFWVWL
ILLGVFIVDATVTLLRRGFRGEKVYEAHRSHAYQFASRQYKRHLPVTLAVVAINLLWLLP
VAACVVFWGLDGALGLVLAYVPLVIIAVKFHAGEPEPASVSSDNESGPL