Protein Info for PFR28_00815 in Pseudomonas sp. RS175

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 408 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF08421: Methyltransf_13" amino acids 3 to 64 (62 residues), 75.1 bits, see alignment E=1e-24 PF13489: Methyltransf_23" amino acids 80 to 237 (158 residues), 59.4 bits, see alignment E=9.4e-20 PF08242: Methyltransf_12" amino acids 102 to 193 (92 residues), 37.5 bits, see alignment E=8.1e-13 PF08241: Methyltransf_11" amino acids 103 to 194 (92 residues), 28.8 bits, see alignment E=3.9e-10 PF08484: Methyltransf_14" amino acids 244 to 403 (160 residues), 203.8 bits, see alignment E=3.6e-64

Best Hits

KEGG orthology group: None (inferred from 87% identity to pfo:Pfl01_1513)

MetaCyc: 35% identical to D-olivose 4-ketoreductase (Streptomyces argillaceus)
2.1.1.-; 1.1.1.-

Predicted SEED Role

"methyltransferase, putative"

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (408 amino acids)

>PFR28_00815 hypothetical protein (Pseudomonas sp. RS175)
MNCRGCGSALALPLIDLGTSPPSNAYVRADQLGQAEQWVPLKVAVCQQCWLVQTEDYTRA
DSLFDAEYAYFSSFSSTWLAHAERYVAEMIERFELGADSRVVEVAANDGYLLQYVAKRGI
TCLGVEPTRSTAQAARAKGLEIREVFFGRDTASQLKGEGWAADLMAANNVLAHVPDINDF
LGGFATLLKPTGVATFEFPQLLTLMAGHQFDTLYHEHFSYLSLTAVQTLCERNGLEVFDV
SQLPTHGGSLRVFVQRADGVLRSVQASVQQQMQAELDAGVKTSVYYTTLAPAAEAIKHGL
LRFLLKAKAEGKRVVGYGAAAKGNTLLNYAGVKPDLLAWVADANPHKQGKYLPGSRIPIV
SPERIALEKPDYVLVLPWNLLSEVSQQLAEVRQWGGQFVIAVPELTVL