Protein Info for PFR28_00620 in Pseudomonas sp. RS175

Annotation: 3-oxoadipate CoA-transferase subunit A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF01144: CoA_trans
  • amino acids 6 to 215 (210 residues), 75.1 bits, E=2.8e-25

Best Hits

Swiss-Prot: 89% identical to CATI_PSEKB: 3-oxoadipate CoA-transferase subunit A (catI) from Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13)

KEGG orthology group: K01039, glutaconate CoA-transferase, subunit A [EC: 2.8.3.12] (inferred from 98% identity to pba:PSEBR_a1265)

Predicted SEED Role

"3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6); Glutaconate CoA-transferase subunit A (EC 2.8.3.12)" (EC 2.8.3.12, EC 2.8.3.6)

MetaCyc Pathways

• 3-oxoadipate degradation (2/2 steps found)
• aromatic compounds degradation via β-ketoadipate (6/9 steps found)
• toluene degradation III (aerobic) (via p-cresol) (7/11 steps found)
• superpathway of salicylate degradation (4/7 steps found)
• L-glutamate degradation V (via hydroxyglutarate) (6/10 steps found)
• catechol degradation III (ortho-cleavage pathway) (3/6 steps found)
• 4-methylcatechol degradation (ortho cleavage) (3/7 steps found)
• L-glutamate degradation XI (reductive Stickland reaction) (3/7 steps found)
• mandelate degradation to acetyl-CoA (7/18 steps found)
• superpathway of aerobic toluene degradation (11/30 steps found)
• superpathway of aromatic compound degradation via 3-oxoadipate (13/35 steps found)

KEGG Metabolic Maps

• Benzoate degradation via hydroxylation
• Butanoate metabolism
• Styrene degradation

Isozymes

Compare fitness of predicted isozymes for: 2.8.3.12, 2.8.3.6

Use Curated BLAST to search for 2.8.3.12 or 2.8.3.6

Protein Sequence (286 amino acids)

>PFR28_00620 3-oxoadipate CoA-transferase subunit A (Pseudomonas sp. RS175)
MAEILSLHDAVKQFVNDGDTVALEGFTHLIPTAAGHEIIRQGKKDLTLVRMTPDLIYDQL
IGAGCARKLIFSWGGNPGVGSLHRLRDAVEKQWPHPMEIEEHSHADLANAYVAGASGLPF
AVLRAYAGSDLPKVNPLIKSVTCPFTGEVLAAVPSVRPDVTVIHAQKADRKGNVLLWGIL
GVQKEAALAAKRCIVTVEEIVDDLNAPMNACVLPTWALSAVCHVPGGAHPSYAHGYTERD
NRFYQAWDPIARDRGTFTAWIDEYIHGTRDFNEFQARLAAASQVKP