Protein Info for PFLU_RS30975 in Pseudomonas fluorescens SBW25

Annotation: acyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 638 signal peptide" amino acids 1 to 22 (22 residues), see Phobius details transmembrane" amino acids 31 to 51 (21 residues), see Phobius details amino acids 63 to 82 (20 residues), see Phobius details amino acids 94 to 113 (20 residues), see Phobius details amino acids 125 to 146 (22 residues), see Phobius details amino acids 152 to 171 (20 residues), see Phobius details amino acids 232 to 252 (21 residues), see Phobius details amino acids 259 to 281 (23 residues), see Phobius details amino acids 291 to 311 (21 residues), see Phobius details amino acids 325 to 344 (20 residues), see Phobius details amino acids 356 to 376 (21 residues), see Phobius details PF01757: Acyl_transf_3" amino acids 1 to 342 (342 residues), 79.7 bits, see alignment E=2.3e-26 PF19040: SGNH" amino acids 416 to 636 (221 residues), 92.5 bits, see alignment E=3.6e-30

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU4132)

Predicted SEED Role

"O-antigen acetylase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3JZM5 at UniProt or InterPro

Protein Sequence (638 amino acids)

>PFLU_RS30975 acyltransferase (Pseudomonas fluorescens SBW25)
MRALAVLSVVAFHAFPSLIRGGFIGVDVFFVISGYLISTIIFNSVALKVFSFRVFYARRI
RRIFPALIVVMVLSLLYGWFALLPKELAELGKHIVGGSAFLSNIMLWFESGYFDRSSDLK
PMLHLWSLGVEEQFYIFWPLLAWIAWWRGLSWFWLVTVLCAGSFLANVEIVNSAPTEAFY
SPYTRFWELLVGSFLAYCSFSSEGRLACTKKFVQQRLLVALFRRSPIEAKKIVVELASIT
GFVLIGLALWNINSEMSFPGYWALLPVLGAACLISSGPSAFLNRAILSNKIAVWFGLISF
PLYLWHWPVLTFLRISVGDMPAREWRIGAVAVSVLLAWLTYRFVEKPLRELPMRITVEYI
LVVSMAILAGIGFYIYRSEGVPQRFPAIIQSITTYKFDPDYVYRRGTCYLDVDQGEALFS
NCKDESSGNRKSLLLWGDSHAAHLYAGYKKSFGVEYAIIQRNASGCPPILGLKLDDAAGL
FRPMCFSINNMVINYARINHPDRVVLSARWDIYNWNGIKDTIIALQSFGISDIDVIGPVP
EWKESLPKQLYRYFQKSDGREVPERMSFGLDPVGMASEESLRKLVESLGARYISAKSILC
NEDGCITRFGDEGRTLSAWDEGHLTEEGSEQLVSKFPR