Protein Info for PFLU_RS26025 in Pseudomonas fluorescens SBW25

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 516 transmembrane" amino acids 20 to 43 (24 residues), see Phobius details amino acids 57 to 75 (19 residues), see Phobius details amino acids 87 to 106 (20 residues), see Phobius details amino acids 112 to 134 (23 residues), see Phobius details amino acids 146 to 168 (23 residues), see Phobius details amino acids 175 to 195 (21 residues), see Phobius details amino acids 208 to 230 (23 residues), see Phobius details amino acids 236 to 256 (21 residues), see Phobius details amino acids 276 to 300 (25 residues), see Phobius details amino acids 312 to 330 (19 residues), see Phobius details amino acids 341 to 360 (20 residues), see Phobius details amino acids 365 to 393 (29 residues), see Phobius details amino acids 412 to 434 (23 residues), see Phobius details amino acids 449 to 470 (22 residues), see Phobius details amino acids 477 to 500 (24 residues), see Phobius details TIGR00711: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family" amino acids 21 to 499 (479 residues), 241.5 bits, see alignment E=8.9e-76 PF07690: MFS_1" amino acids 26 to 417 (392 residues), 175.2 bits, see alignment E=9.4e-56

Best Hits

KEGG orthology group: None (inferred from 100% identity to pfs:PFLU5296)

Predicted SEED Role

"Methylenomycin A resistance protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K299 at UniProt or InterPro

Protein Sequence (516 amino acids)

>PFLU_RS26025 MFS transporter (Pseudomonas fluorescens SBW25)
MNIDRSASDNPVTRRFPRIAALCAAYLGTFLATLDISVVNVALPTLQDALQTDISGLQWV
VNAYTICLSAFMLSSGPIADRYGHKRAWLAGVGVFTVGSAVCAMASNLDLLLFGRAVQGV
AGALLIPGALPILSHAFPDAEERAHVIGGWSAFSALALILGPLLGGLLLHGIGWQSIFVI
NLPLGMIAIGLGIWGIREHKQQARTALDPAGQVLSVVCLASLTYGLISIGQPGLNSLIPI
AALAVALVVFILFMFVERCVDRPLLPLSLFRRRSFAVVNLASFTLGFSYYSCLFFFSIYL
QTIQGLSVVETGWRMMPQFLVTGCVSILYGRLSAVMTSRRLLVAGYGVTALAMSTMVTFT
AHTPYWIVGTLFGLLGLGAGLAVPATSMAVMTAAPIDRMGVASTTMNALRQMGMTIGVAF
LGTLMSSEASRVLAAALRDQGVAKAPEIARYVIAHGVASSDSLIVSTLFVPAMEHGFHVA
MMVSGLACALVALMLLITSFEADTLPSPPPKHTDGG