Protein Info for PFLU_RS25445 in Pseudomonas fluorescens SBW25

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 255 transmembrane" amino acids 6 to 29 (24 residues), see Phobius details amino acids 32 to 67 (36 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 108 to 127 (20 residues), see Phobius details amino acids 139 to 164 (26 residues), see Phobius details amino acids 176 to 197 (22 residues), see Phobius details amino acids 206 to 226 (21 residues), see Phobius details amino acids 233 to 252 (20 residues), see Phobius details PF01925: TauE" amino acids 20 to 249 (230 residues), 78.4 bits, see alignment E=3.4e-26

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 100% identity to pfs:PFLU5185)

Predicted SEED Role

"membrane protein, putative"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K1Z2 at UniProt or InterPro

Protein Sequence (255 amino acids)

>PFLU_RS25445 sulfite exporter TauE/SafE family protein (Pseudomonas fluorescens SBW25)
MNTFLAFYQHIGPALTLLVIGTFLLAGTVKGVIGLGLPTVAMGLLGLAMLPAQAAALLII
PSTVTNLWQLAFGGHLSALIKRLWPMLLLIFLGTGLGTLWLGMDGGGWVVHALGGALLMY
ALSGLFLPSFKVAPHTERWLGPLCGGITGIITSATGVFVIPAVPYLQALGLSRDQLVQAL
GLSFTVSTLALAAGLAWRGTLGGGELNASLLALVPALLGMWLGQVVRQRISALLFKRVFF
IGMALLGGHLLISGA