Protein Info for PFLU_RS23035 in Pseudomonas fluorescens SBW25

Annotation: endolytic transglycosylase MltG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 377 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details TIGR00247: conserved hypothetical protein, YceG family" amino acids 7 to 330 (324 residues), 247.7 bits, see alignment E=9e-78 PF02618: YceG" amino acids 44 to 329 (286 residues), 274.3 bits, see alignment E=6.1e-86

Best Hits

KEGG orthology group: K07082, UPF0755 protein (inferred from 100% identity to pfs:PFLU4701)

Predicted SEED Role

"FIG004453: protein YceG like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K0N0 at UniProt or InterPro

Protein Sequence (377 amino acids)

>PFLU_RS23035 endolytic transglycosylase MltG (Pseudomonas fluorescens SBW25)
MIRKLVVLLLIALFSAALLLGYSAWKFDSALKQPLNLTQEQLLDVPAGATPTGTFNRLEA
DGVLEGAFWLRLYWRFNLDGQPLHSGEYRMTPGMTAQGLIGLWQRGEVVQYSLTLVEGWN
FRQVRSALAKHEKIVQTLSGLTDSEVMDKLGHPGVFPEGRFFPDTYRFVRGMTDVEFLKK
AYNRLDDVLAQEWSKRAADAPYTDPYQALIMASLVEKETGVPEERGQIAGVFVRRLKIGM
LLQTDPTVIYGLGERYNGKLTRAHLKEANPYNTYMVAGLPPTPIAMVGREAIHAALNPVP
GSSLYFVARGDGSHIFSDDLDAHNAAVREFQLKRRADYRSSPAPVVKPAEDAAPSADAPA
EPPAAPVPDTAAPQSPQ