Protein Info for PFLU_RS21020 in Pseudomonas fluorescens SBW25

Annotation: YeeE/YedE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 403 transmembrane" amino acids 14 to 33 (20 residues), see Phobius details amino acids 39 to 65 (27 residues), see Phobius details amino acids 79 to 99 (21 residues), see Phobius details amino acids 106 to 128 (23 residues), see Phobius details amino acids 146 to 164 (19 residues), see Phobius details amino acids 182 to 203 (22 residues), see Phobius details amino acids 233 to 252 (20 residues), see Phobius details amino acids 262 to 283 (22 residues), see Phobius details amino acids 303 to 322 (20 residues), see Phobius details amino acids 328 to 347 (20 residues), see Phobius details amino acids 357 to 379 (23 residues), see Phobius details PF04143: Sulf_transp" amino acids 54 to 381 (328 residues), 235.8 bits, see alignment E=4.5e-74

Best Hits

KEGG orthology group: K07112, (no description) (inferred from 100% identity to pfs:PFLU4280)

Predicted SEED Role

"FIG00954845: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See C3K033 at UniProt or InterPro

Protein Sequence (403 amino acids)

>PFLU_RS21020 YeeE/YedE family protein (Pseudomonas fluorescens SBW25)
MSTSLPLTPARKPVAPLVAFIILVLGALFLQNSVGSRQVLLLVVGAALGLTLYHAAFGFT
SAWRVFINDRRGAGLRAQMVMLAVAVLLFFPALGAGSLFGQPVVGLVAPAGVSVVFGAFI
FGIGMQLGGGCASGTLFTVGGGNARMLVTLLFFICGSLIATHHVDWWFALPAFPAVSIVK
SFGVLPALGLSLTVFALIAVITVRLEKGRHGQLEEGVKSEHQGVRRFLRGPWPLVWGAIG
LALLNYATLALAGRPWGITSAFALWGAKVASGLGVDVASWAFWQMPGNAKALAAPVWEDI
TSVMDIGIVLGALLAAGLAGRFAPSLNIPARSLVAAVIGGLLLGYGSRLAYGCNIGAYFS
GIASGSLHGWVWLVAAFIGNGVGVRLRPFFFDGERPQVALSGC