Protein Info for PFLU_RS11910 in Pseudomonas fluorescens SBW25
Annotation: filamentous hemagglutinin N-terminal domain-containing protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Predicted SEED Role
"Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See C3K8K2 at UniProt or InterPro
Protein Sequence (4083 amino acids)
>PFLU_RS11910 filamentous hemagglutinin N-terminal domain-containing protein (Pseudomonas fluorescens SBW25) MVRCKSPVNLKAQETVLRLKPLAQAIALLMVAGNAHAATAFSSSWFAEKGATQAATAARL SAGQVPGIPSLNEQARVNQQLARSISTLNTSVAAIAAQQAAQAAGRQAAFGQVSTIPDGL GKGGLQVDNSLTQGWINAKNPTQSQSGGKTTVTIEQTADKAILNWETFNVGRNTTVDFQQ QSSWAVLNRVNDPNARPSEIQGQINGAGTVMIVNRNGVVFSGTSQVNVRNLVAAAANITD EQFTQRGIYVDGTGSQPTFTDAAGKVQVQRGALIQTHNPATSTDSGGYALLLGSEVENAG TITTAKGQATLAAGDSFYIRKGVGTTGNDRSTTRGNEVATSLNAGSSAGKVTNSGLIMAS TGDITLTGHQVQQNGVALASTSVDTRGTIHLLNAASDSTGSVTLGEGSTTAILLDSSGST ALNSQKGNGLIKLDGTPANLITGAFNNLSAVADRTDQSRIEIVSGGTVDFQKGSTTLATG GQVAVSAAGRSLVRDGAMIDVSGAIGVRVSMESNNIKINVQGNEQRDAPVNRDGGQLINN DVWVDLRELVFVPAGTNGYATDRWYTAGGLLEVGGYLGTQGHSVGEWMAQGGTVTFTGKD VVTQQGAQINLSGGTVDVQAGYIQQTWLKGPDGRLYELSNAPGDILYSGFYKGYEDTSKR WGQTDYYYNPMIAKQRRYESGYTVGRDAGKLVIGTTSAVLEGQVISDVFQGTRQTQAPNI NLDGYQQSQKAMAQRAQLIIGGYTPVYNKTTGTLRYALTGNADQVLIDSNTQKIADGLDL TTALPADRQGKMVLDSDQLNGYELGAIKVGATRQITVNGALQVADGGDITLFGPGVNITA NLTAHGGSINAGNILNQVDPLKGTVLDAIVAGNGGVNLASGVKLDTTGRWSNLLLEPTNN SGVAYVNGGKVSLRSTGNVNLAAGSVVDASSGGILGLDGKLIGGKGGDVTLASLSSLGLD GEIRGYGVSGGGTLALQARKVQIGTRATAPDAGTVQLSGDFFNKGFSAYDITGNEGLLVT DGTRVDVTTPVYRLGEQTLAASSGSDPANALERWTPALYQENPTQGVLTQRRGASLTLTA GSKDSTAAQLATTALTVGQGAVINVDPGQGINLRSVGQLTLNGSLNAWGGSVSLGGLSVS PQAWEQPIAAGHDRSIWVGENALIDVASRAVTAVSNRGNVYGQVLNGGKISIGGDINLTT GIASAGDVFVVVREGARLDASGAQAMLDVPGQGRVPVSSNGGSISFASNNGLYLDGSFVA RAGGAGAAGGSLALALESPYYLKAGVNDSVLNVRELVLSQTHQTSPNANLEYGHGHLGVD QVTAGGFDNLALLSNGLLSFDGDVSLNMGQSLRLYGGSYNLSESAAANSRVNLSAPYLLL AGLLAPAETGKEAYTRAVPVLPNPSVLATTAQFNANANLIDVRGNVVFGNKSYLLRPDNS QASLERRGFDDVQLTSQGDLRFLAGAGADVIAQGISTQLVTGGDMTLRAAQLYPATEVGA RVLAGYVNNAASNGTGFNYDPTRTLTIARTANSNAAMPYSVFGRLQLGGPTIKQGGVVRA PLGLIEIGNLGSTDVQLLPGSLTSVSGKGLVLPYGGTVDGQIYKYNGKTVTFIGQGGGNV AGSLNVGVILGGQAVEVLPQATLDLSGGGELLGAGFISGRGGSTDARYNPLVQFGANGGF VLPGLSTNPIYAIVPGVQPGYAPVAPEGGAVDPLIGQQITIGAGVPGLAAGTYTLMPSTY ALMPGAFRLEINGLAGMGADGATQALRNGSWATAGRLSIANTGISNSTASQVILTSADML RRYSQYNETGYAQFAVADATRLGIPRALLPVDAKTLQLALRPGAGADAFSFQGIGRFEAA DGGYGGTVSLINEEKGSLGRDIEIVAAGNAATANFKGITVDADSLNAMGAARLLIGGMTY VTYGQGGNYINLPSSITSSIILRDGANLAAPEVLLVTSTGKITLEQGASINTIGQGKASY DARDGFIYNLSNVLAVSNGLLNVVAAPSLGEVISGGIQLGVCNSAPCSGQTALYSEGSIV TLTDSSLQMGDEVRYGTRHLNLGVSSINVGSPEALAAAAANNRLPVGMTLNQQVLERLLR GDTQFGAPALETLQLSARDSFNFYGTTTLDTYDAVTGKSMLSNLMLSTPAIYGSGGLNDV ATVHTANLIWQGAVAPPVAAVTGGAGTGSGRLDINAERIEFGYGDFAQPSTTKTFDRLAL GFANVNLIASERITANHKGSLSVYQSQGAFDAIKGFAYSGGNLNILTPLMTGEAGSVNRI TAGGAIDVSASAGAVGKVDGIGGELSLQGDSLRLATAVVLPSGKVTLGARGDVVLTDAAS IDVSGRAIAFNDLTKYSAGGEVLLESRAGNVQQAAGSTIDLSAQHNQAGKLRAVAVDGAA GIVDLAGKIIAGSSGDYDAGGTRVPYLAGAVEIQAQRLGGSGTLSDQFAALNQRLNQGQV YGARSFQLKQGDLTIGNDVKANSVNVSIDNGSLRVTGLVDASGERVGSINLAAKNGLSLD GTAVLDAHGSQLRVDSYGKIIDSPNRAIVVLGSGLGQLTLAEGARIDLRHGTAAATGNDG RSRGTLELNAPRVGGNDIAIDARGQLTIQGARSIALNGMRTYDDAPTKTDETPNGRPYQV IDQTYLQGVNDANTTFIDAARVNDNLLRKLAGLNNATYGDVFHLRPGVEIISKTPDGDLV VQGDLDLSSYRYASLKSTAKTESGSLTLRAGGDLNIYGSINDGFAAPPATDDDNGWVLRA GIDYTGGTVVIPGSGVTLEVGTVFPAGAALNFDVLTNPLFLPPGTRLPVAATLKQPLVLP AGTVLAAAVRDASGNVLFAAGTLLTQSQTLAIGSVLDAGSLLSTSASVDGLIWPKGVPLA TKVTLTASQVLPRGALLPSGTDVKLPGGVESVTLRDAGHPGKNWAIAPMLEEGAQSWSIR LVAGADTEAADSRLLQPHPVSGNLRLADSHYGAFGKGAQVWTEEGSIGWFGDDSMVGQPV DFDAIQYPGVCDDFPEYCVVSGEAYTLLVGGSSRFSVIRTGAADLDLLAAGNLSMESLFG VYTAGSSSTGTSTNDPYNLKRALGSNGKVLANAGGNEKLVNADTGSLYRAWYPDTGGNLL LKVGGNLTGNITSPAQNGVGRPVPSDQGQDSANVGNWLWRQGNGLSGSQAQATAWWINFG SYVATDRADQMVGFTGFGTLGGGNLNVDVGGDAGLISPVSSTALNVSRRSQGLVLAVGST GRVGADGSVQLTGGGDLNLRVGGAVNPASQTFVEHLNGALVNLRGHVQLTGGALGSLTLR YGNQRKDQSPSEVRAYDPLRATSAFAAGGLSLLPGDATFSLSTRGDLVLQDVADPGRAPQ MNALTYVNKGVNGIGQSWFSLWTDRTAVDLFSAGGNLTPLTQTLETDMAAVYPATLRAVA ANGSLYYGSASTSNPGDVQPLRALVLAPSSNGQLELLAGDSISGGDLTISRSSAAPNSLA TILRPAFAGFLTDQKTAIVGSGNLSSDGNIATLTVSPLFAFGPNTASMAWGDALEPARFY ALSGDLLGVNSGRALTITGVGDARFGQTFYEGAGPVWMQAGRDIVGSGTRLSGASAGVTD TGQYTFTGNLFVHNSPTDISIASAGRDILYSSFNVAGPGTLELTAGRNIQMEDKVAVNSL GAVAAGDSRPGASIVMQAGMGPNGPDYRRFVEAYLNPANLAQPGESLQGSKVAKTYENEL VSWLTERFGFAGDSEQARTYYAALPAEQQRIFARDVYFAELKAAGREYNQDGSVRQGSYV RGRTAIARLFPETDVAGNPITYKGDITMFGGAGVHTNFGGSIQMLTPGGRQTFGIEGAAP PSTAGLITQGSGDIQLYSLGSILLGQSRIMTTFGGSIMAWTSEGDINAGRGSKTTVVYTP PKRVYDNWGNVGLSPSVPSTGAGIATLNPIPEVPAGDIDLIAPMGTIDAGEAGIRVSGNV NIAALRVVNAANIQSQGKSSGVPVSATVNTGAMSSASAAGAAASQAAEDAARSQQAAAKQ GRPSIMTVEVLSLGSEPLPREPEPAQKTSGYNPSSPVQVLGAGPLSEQARARLTDEERQQ ISL